RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ATP6V1B2P21281 511 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 NT5EP21589 574 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CD1CP29017 333 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PEBP1P30086 187 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 LCN1P31025 176 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CDKN2CP42773 168 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MAGEA2P43356 314 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 GZMMP51124 257 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PSMD4P55036 377 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 LIM2P55344 173 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 RAB38P57729 211 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OR4D2P58180 307 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ESRRGP62508 458 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 HERV-K104P63124 156 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 DCDP81605 110 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MERTKQ12866 999 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ILKQ13418 452 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 KLF5Q13887 457 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 C2orf76Q3KRA6 126 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 GPAT3Q53EU6 434 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 LRRC23Q53EV4 343 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CYBRD1Q53TN4 286 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM31Q5JXX7 168 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 LINC00242Q5T6M2 205 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 AGAP7PQ5VUJ5 663 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 AP1ARQ63HQ0 302 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 LPCAT4Q643R3 524 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SAXO2Q658L1 398 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OR2T5Q6IEZ7 315 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 FRMPD2BQ6IN97 320 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ADNP2Q6IQ32 1131 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKRD26P1Q6NSI1 321 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 Q6ZVH6 145 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 C16orf62Q7Z3J2 963 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 VN1R4Q7Z5H5 301 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 RANBP3LQ86VV4 465 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ZDHHC21Q8IVQ6 265 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MSRB3Q8IXL7 192 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PEX5LQ8IYB4 626 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ST13P4Q8IZP2 240 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CA13Q8N1Q1 262 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OR2L13Q8N349 312 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 RNF175Q8N4F7 328 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CBR4Q8N4T8 237 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 DHRSXQ8N5I4 330 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ZBTB44Q8NCP5 570 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OR7G1Q8NGA0 311 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OR2T29Q8NH02 315 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OR4C6Q8NH72 309 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OR5K1Q8NHB7 308 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 FBXO30Q8TB52 745 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PNPT1Q8TCS8 783 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF675Q8TD23 568 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MAGEE2Q8TD90 523 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ST7LQ8TDW4 575 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PHF10Q8WUB8 498 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PATE1Q8WXA2 126 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC35B4Q969S0 331 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CIDECQ96AQ7 238 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 TPD52L3Q96J77 140 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC35G5Q96KT7 338 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CXorf58Q96LI9 332 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 GPR137Q96N19 417 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF681Q96N22 645 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF285Q96NJ3 590 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ATP6V0BQ99437 205 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 STACQ99469 402 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CIB1Q99828 191 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 APOL4Q9BPW4 351 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MAPKAP1Q9BPZ7 522 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 TTYH2Q9BSA4 534 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 FUNDC2Q9BWH2 189 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 RBM24Q9BX46 236 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF717Q9BY31 904 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKRD60Q9BZ19 345 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PRRG3Q9BZD7 231 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ING2Q9H160 280 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC26A1Q9H2B4 701 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SPNS1Q9H2V7 528 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 OR51I1Q9H343 314 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 TCEAL2Q9H3H9 227 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PIGUQ9H490 435 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 GLIPR2Q9H4G4 154 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKRD19PQ9H560 264 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 COQ10BQ9H8M1 238 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 Q9HAA7 133 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 VCX3AQ9NNX9 186 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 LHX9Q9NQ69 397 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PRTFDC1Q9NRG1 225 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 DDX28Q9NUL7 540 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 C14orf105Q9NVL8 296 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 USE1Q9NZ43 259 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 PRODH2Q9UF12 536 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MLXQ9UH92 298 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF639Q9UID6 485 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 RIMS3Q9UJD0 308 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 NXT1Q9UKK6 140 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CES1P1Q9UKY3 287 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 BLOC1S6Q9UL45 172 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 IFT52Q9Y366 437 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms