RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 KIR2DS4P43632 304 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 GPR6P46095 362 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 PRLHRP49683 370 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 KLK7P49862 253 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TAS2R39P59534 338 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 PRPS1P60891 318 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 RAP1BP61224 184 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 SELENOTP62341 195 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 BASP1P80723 227 aaKnown RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 PITPNAQ00169 270 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 SLC25A11Q02978 314 aaKnown RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TGFBR3Q03167 851 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACVR1Q04771 509 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 IFFO1Q0D2I5 559 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 C2orf80Q0P641 193 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TWF1Q12792 350 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 FADDQ13158 208 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ARFRP1Q13795 201 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 GNA13Q14344 377 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 GGTLC2Q14390 218 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 CLINT1Q14677 625 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR7A5Q15622 319 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZBTB6Q15916 424 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 UAP1Q16222 522 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 BCL2A1Q16548 175 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 IL17AQ16552 155 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 KCTD19Q17RG1 926 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ACTL10Q5JWF8 245 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 RBM48Q5RL73 367 aaKnown RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 SAPCD1Q5SSQ6 148 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 CPTPQ5TA50 214 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 C1orf146Q5VVC0 180 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 APOBEC3HQ6NTF7 200 aaKnown RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 CLEC18BQ6UXF7 455 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 IL34Q6ZMJ4 242 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 AHSA2Q719I0 299 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 COX15Q7KZN9 410 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF571Q7Z3V5 609 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 HORMAD1Q86X24 394 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR5T1Q8NG75 326 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR10G3Q8NGC4 313 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR8J2Q8NGG1 315 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR10R2Q8NGX6 335 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR2L8Q8NGY9 312 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR8U1Q8NH10 309 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR51A7Q8NH64 312 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 OR5AK3PQ8NH89 298 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 PHF10Q8WUB8 498 aaKnown RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 IFT81Q8WYA0 676 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ING5Q8WYH8 240 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 RORBQ92753 470 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 FGF14Q92915 247 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TMEM54Q969K7 222 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 EEF1AKMT3Q96AZ1 226 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 RCN3Q96D15 328 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF75AQ96N20 296 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TSNAXQ99598 290 aaKnown RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 FOXC2Q99958 501 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 SH3GL3Q99963 347 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 RARRES2Q99969 163 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 NAT9Q9BTE0 207 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 POTEKPQ9BYX7 375 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 SHCBP1LQ9BZQ2 653 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 PORCNQ9H237 461 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 RNF167Q9H6Y7 350 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ASB8Q9H765 288 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 UBE2ZQ9H832 354 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 WDR54Q9H977 334 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 PLEKHA1Q9HB21 404 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 TREX1Q9NSU2 369 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 IMP3Q9NV31 184 aaKnown RBP1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 AIG1Q9NVV5 245 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 C1orf109Q9NX04 203 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 MAT2BQ9NZL9 334 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 FRMPD3Q5JV73 1810 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 ARHGAP23Q9P227 1491 aa1.67□□□□□ -2.14
HMGB1P35-201ENST00000503360 THSD7BQ9C0I4 1608 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 IGHV3OR16-13A0A075B7E8 117 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ANKRD20A5PA0PJZ0 165 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 GOLGA8IPA6NC78 632 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RBMY1BA6NDE4 496 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RBMY1EA6NEQ0 496 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 TVP23AA6NH52 213 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 FAM166BA8MTA8 275 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 H0Y9J4 135 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 GOLGA6L19H0YKK7 550 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SMKR1H3BMG3 65 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SMLR1H3BR10 107 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SULT1C2O00338 296 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ERI3O43414 337 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SGCEO43556 437 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 CDC40O60508 579 aaKnown RBP eCLIP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 ZNF780AO75290 641 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 TNFAIP8O95379 198 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 BRI3O95415 125 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 DEXIO95424 95 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 GP1BAP07359 652 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 SERPINA6P08185 405 aa1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RBMY1DP0C7P1 496 aaKnown RBP1.66□□□□□ -2.14
HMGB1P35-201ENST00000503360 RBMY1A1P0DJD3 496 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms