RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 HKR1P10072 659 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 CD80P33681 288 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 LRRN1Q6UXK5 716 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 PGAM4Q8N0Y7 254 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 CCDC197Q8NCU1 140 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 SDR9C7Q8NEX9 313 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 OR52E2Q8NGJ4 325 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 GNPDA2Q8TDQ7 276 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 NEIL1Q96FI4 390 aaPredicted RBP14.36□□□□□ -0.11
SMC4-226ENST00000497311 PLEKHA8Q96JA3 519 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 NSMCE2Q96MF7 247 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 TMEM246Q9BRR3 403 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 MS4A7Q9GZW8 240 aaPredicted RBP14.36□□□□□ -0.11
SMC4-226ENST00000497311 ZMAT3Q9HA38 289 aaKnown RBP14.36□□□□□ -0.11
SMC4-226ENST00000497311 CYB5R1Q9UHQ9 305 aa14.36□□□□□ -0.11
SMC4-226ENST00000497311 A0A1B0GWJ7 208 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 OR6C68A6NDL8 312 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 DNAJC9-AS1A6NH13 148 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 FSTL3O95633 263 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 PPIAL4GP0DN37 164 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 HSD17B1P14061 328 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 IRF2P14316 349 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 RRM2P31350 389 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 MSX2P35548 267 aaPredicted RBP14.35□□□□□ -0.11
SMC4-226ENST00000497311 GATA4P43694 442 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 GSSP48637 474 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 MNAT1P51948 309 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 TPTEP56180 551 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 PAX2Q02962 417 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 TRAP1Q12931 704 aaKnown RBP14.35□□□□□ -0.11
SMC4-226ENST00000497311 TSPAN31Q12999 210 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 BAMBIQ13145 260 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 GK2Q14410 553 aaPredicted RBP14.35□□□□□ -0.11
SMC4-226ENST00000497311 ZNF404Q494X3 552 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 SAMD4BQ5PRF9 694 aaKnown RBP14.35□□□□□ -0.11
SMC4-226ENST00000497311 NLRC3Q7RTR2 1065 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 OR8B3Q8NGG8 313 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 RAB40AQ8WXH6 277 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 SLCO4A1Q96BD0 722 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 DUX5Q96PT3 197 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 OR8B2Q96RD0 313 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 FN3KQ9H479 309 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 NDE1Q9NXR1 346 aa14.35□□□□□ -0.11
SMC4-226ENST00000497311 IGHV2-70DA0A0C4DH43 119 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 ARPC2O15144 300 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 ZNF823P16415 610 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 GGT2P36268 569 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 PMELP40967 661 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 PRSS12P56730 875 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMC4-226ENST00000497311 MAB21L1Q13394 359 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 FAM201AQ5SY85 155 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 SLC35F1Q5T1Q4 408 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 C16orf89Q6UX73 402 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 ZNF620Q6ZNG0 422 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 PGAP1Q75T13 922 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 NAA40Q86UY6 237 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 CELF2-AS1Q8N7Q2 184 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 SPRYD4Q8WW59 207 aaPredicted RBP14.34□□□□□ -0.11
SMC4-226ENST00000497311 ERGIC1Q969X5 290 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 ZNF48Q96MX3 618 aaPredicted RBP14.34□□□□□ -0.11
SMC4-226ENST00000497311 CDRT15Q96T59 188 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 IL1RAPQ9NPH3 570 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 PNRC2Q9NPJ4 139 aaKnown RBP14.34□□□□□ -0.11
SMC4-226ENST00000497311 MRPL22Q9NWU5 206 aaKnown RBP14.34□□□□□ -0.11
SMC4-226ENST00000497311 CD300AQ9UGN4 299 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 KCNG2Q9UJ96 466 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 PCDHGB1Q9Y5G3 927 aa14.34□□□□□ -0.11
SMC4-226ENST00000497311 M0R135 149 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 IGHV4-38-2P0DP08 117 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 CD200P41217 278 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 MTNR1AP48039 350 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 PITPNBP48739 271 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 SPATS1Q496A3 300 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 PGBD2Q6P3X8 592 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 MRPL21Q7Z2W9 205 aaKnown RBP14.33□□□□□ -0.12
SMC4-226ENST00000497311 ZDHHC21Q8IVQ6 265 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 OR52L1Q8NGH7 329 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 OR11L1Q8NGX0 322 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 Q8TCH9 128 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 SPTSSAQ969W0 71 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 UPRTQ96BW1 309 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 ZNF799Q96GE5 643 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 C1orf147Q96MC9 270 aaPredicted RBP14.33□□□□□ -0.12
SMC4-226ENST00000497311 ZNF747Q9BV97 191 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 CLN8Q9UBY8 286 aa14.33□□□□□ -0.12
SMC4-226ENST00000497311 IGHV3OR16-10A0A075B7F0 116 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 KIR2DS1A0A191URI9 304 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 KRT36O76013 467 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 RAD23AP54725 363 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 MXRA7P84157 204 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 OR8G1Q15617 311 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 CLEC12AQ5QGZ9 265 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 RPL13AP3Q6NVV1 102 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 DCDC5Q6ZRR9 648 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 DEFB107AQ8IZN7 70 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 PROKR2Q8NFJ6 384 aa14.32□□□□□ -0.12
SMC4-226ENST00000497311 SLC25A28Q96A46 364 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms