RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ZNF799Q96GE5 643 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 C1orf159Q96HA4 380 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 INTS14Q96SY0 518 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 PKP2Q99959 881 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 ABHD6Q9BV23 337 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 SAP30LQ9HAJ7 183 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 YAE1D1Q9NRH1 226 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 KRT84Q9NSB2 600 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 DECR2Q9NUI1 292 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 TVP23BQ9NYZ1 205 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 ZDHHC8Q9ULC8 765 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 OAZ3Q9UMX2 235 aa13.67□□□□□ -0.22
DNMT3A-215ENST00000496570 MALRD1Q5VYJ5 2156 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 ZAR1LA6NP61 321 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 IQCF6A8MYZ5 107 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 LCATP04180 440 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 POLR2IP36954 125 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 GPR6P46095 362 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 CHN2P52757 468 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 TPTEP56180 551 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 EIF2B1Q14232 305 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 SNAPC1Q16533 368 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 SLX4IPQ5VYV7 408 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 C12orf73Q69YU5 71 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 CYB5R2Q6BCY4 276 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 SPATC1Q76KD6 591 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 CXXC5Q7LFL8 322 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 OR8G5Q8NG78 346 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 SPTSSAQ969W0 71 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 DIRC2Q96SL1 478 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 KCNJ15Q99712 375 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 CIB1Q99828 191 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 DCAF16Q9NXF7 216 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 KLHDC2Q9Y2U9 406 aa13.66□□□□□ -0.22
DNMT3A-215ENST00000496570 CUBNO60494 3623 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 SAC3D1A6NKF1 404 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 ZNF878C9JN71 531 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 H0YL77 283 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 MLNRO43193 412 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 CRLF1O75462 422 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 OPRL1P41146 370 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 GZMKP49863 264 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 PRKXP51817 358 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 KLHL12Q53G59 568 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 ZMAT1Q5H9K5 638 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 SLC35D3Q5M8T2 416 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 DRAM2Q6UX65 266 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 PRSS45Q7RTY3 260 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 BCDIN3DQ7Z5W3 292 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 OR2Z1Q8NG97 314 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 CLDND2Q8NHS1 167 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 OTOSQ8NHW6 89 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 HPS1Q92902 700 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 ELMOD3Q96FG2 381 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 SLC30A2Q9BRI3 323 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 COPS4Q9BT78 406 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 OSBPL10Q9BXB5 764 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 CENPMQ9NSP4 180 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 TREM2Q9NZC2 230 aa13.65□□□□□ -0.22
DNMT3A-215ENST00000496570 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.65□□□□□ -0.225e-11■■□□□ 11.7
DNMT3A-215ENST00000496570 A8MV72 311 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 TPD52L2O43399 206 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 PPIHO43447 177 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 SLC2A1P11166 492 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 LMO4P61968 165 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 TNFAIP6P98066 277 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 ZNF92Q03936 586 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 APOFQ13790 326 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 GLYATL3Q5SZD4 288 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 AVPI1Q5T686 147 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 RHOUQ7L0Q8 258 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 SHFQ7M4L6 423 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 OR2AE1Q8NHA4 323 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 PLEKHA8Q96JA3 519 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 TEAD3Q99594 435 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 GABARAPL3Q9BY60 117 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 NARFLQ9H6Q4 476 aa13.64□□□□□ -0.23
DNMT3A-215ENST00000496570 PRR32B1ATL7 298 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 E9PQ18 207 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 IGFBP5P24593 272 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 NAA10P41227 235 aaPredicted RBP13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 SLC6A9P48067 706 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 HCCSP53701 268 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 HFEQ30201 348 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 AADACL4Q5VUY2 407 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 ZNF283Q8N7M2 679 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 BHLHE23Q8NDY6 225 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 OR10AD1Q8NGE0 317 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 ITLN1Q8WWA0 313 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 CCL17Q92583 94 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 SPSB4Q96A44 273 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 ZNF582Q96NG8 517 aaPredicted RBP13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 REPIN1Q9BWE0 567 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 EGLN1Q9GZT9 426 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 ZNF319Q9P2F9 582 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 IL19Q9UHD0 177 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 WIPI2Q9Y4P8 454 aa13.63□□□□□ -0.23
DNMT3A-215ENST00000496570 LOC100289279A0A1B0GTE1 492 aa13.62□□□□□ -0.23
DNMT3A-215ENST00000496570 FAM157AC9JC47 383 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms