RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 RAMP1O60894 148 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 RGS11O94810 467 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 PDGFBP01127 241 aaPredicted RBP9.81□□□□□ -0.84
CMSS1-208ENST00000496116 CD74P04233 296 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 AMY2AP04746 511 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 LIFP15018 202 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF24P17028 368 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 GSK3AP49840 483 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 PRKXP51817 358 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF121P58317 390 aaPredicted RBP9.81□□□□□ -0.84
CMSS1-208ENST00000496116 CSNK2A1P68400 391 aaPredicted RBP9.81□□□□□ -0.84
CMSS1-208ENST00000496116 H3F3AP84243 136 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 IKZF1Q13422 519 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 MEF2DQ14814 521 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 CSRP2Q16527 193 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 MOGAT2Q3SYC2 334 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 AWAT2Q6E213 333 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF529Q6P280 563 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 RPS19BP1Q86WX3 136 aaKnown RBP9.81□□□□□ -0.84
CMSS1-208ENST00000496116 OR2AK2Q8NG84 335 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 AQP3Q92482 292 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 ZC3H10Q96K80 434 aaKnown RBP9.81□□□□□ -0.84
CMSS1-208ENST00000496116 NUDT16L1Q9BRJ7 211 aaKnown RBP9.81□□□□□ -0.84
CMSS1-208ENST00000496116 NAA11Q9BSU3 229 aaPredicted RBP9.81□□□□□ -0.84
CMSS1-208ENST00000496116 ZMAT3Q9HA38 289 aaKnown RBP9.81□□□□□ -0.84
CMSS1-208ENST00000496116 GLTPQ9NZD2 209 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 UBQLN2Q9UHD9 624 aa9.81□□□□□ -0.84
CMSS1-208ENST00000496116 A0A1B0GTI1 187 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 TMEM82A0PJX8 343 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 TMEM235A6NFC5 223 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 DISC1C4P0D8 188 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 NPIPA2E9PIF3 369 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 NPIPA3F8WFD2 350 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 RAB27BO00194 218 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 RER1O15258 196 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 IGHEP01854 428 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 CD63P08962 238 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 CCL3P10147 92 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 NFYAP23511 347 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 CSNK1A1P48729 337 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 CX3CR1P49238 355 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 LSM6P62312 80 aaKnown RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 MPPED2Q15777 294 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 GRK1Q15835 563 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF260Q3ZCT1 412 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 C11orf88Q6PI97 169 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 MUC20Q8N307 709 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF283Q8N7M2 679 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 CHST4Q8NCG5 386 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 OR8B12Q8NGG6 310 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 PNPLA2Q96AD5 504 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 JSRP1Q96MG2 331 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 NELFAQ9H3P2 528 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 POFUT1Q9H488 388 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 PRDM6Q9NQX0 595 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 SLC39A1Q9NY26 324 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 MAB21L2Q9Y586 359 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 TEX51A0A1B0GUA7 166 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 PLSCR5A0PG75 271 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 GJE1A6NN92 205 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 F5H5P2 479 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 L7N2F9 121 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 M0QYG6 137 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 GOSR2O14653 212 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 CBR3O75828 277 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 VSIG8P0DPA2 414 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF17P17021 662 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 MSR1P21757 451 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 OR3A3P47888 321 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 GMFBP60983 142 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 UNC119Q13432 240 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 EXOSC2Q13868 293 aaKnown RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 POU4F3Q15319 338 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 ZMYND11Q15326 602 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 FAM189A2Q15884 450 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 SLC23A3Q6PIS1 610 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 DOK3Q7L591 496 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 ANGPTL5Q86XS5 388 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 C1orf210Q8IVY1 113 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 GALNT16Q8N428 558 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 BPIFB2Q8N4F0 458 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 PAQR4Q8N4S7 273 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 GUCD1Q96NT3 240 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 GNRHR2Q96P88 292 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 PRRT1Q99946 306 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 PIGQQ9BRB3 760 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 TINAGL1Q9GZM7 467 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 ZNF160Q9HCG1 818 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 PNRC2Q9NPJ4 139 aaKnown RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 GPR84Q9NQS5 396 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 FBLN5Q9UBX5 448 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 OPN4Q9UHM6 478 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 KLK13Q9UKR3 277 aa9.8□□□□□ -0.84
CMSS1-208ENST00000496116 FARSAQ9Y285 508 aaKnown RBP9.8□□□□□ -0.84
CMSS1-208ENST00000496116 MPC2O95563 127 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 GP1BAP07359 652 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 OR4E1P0C645 316 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 SLC2A1P11166 492 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 CCL1P22362 96 aa9.79□□□□□ -0.84
CMSS1-208ENST00000496116 MLF1P58340 268 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms