RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 TTLQ8NG68 377 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 OR5K2Q8NHB8 316 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 OR51E1Q8TCB6 317 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 C17orf50Q8WW18 174 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 GSDMAQ96QA5 445 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 TMEM185BQ9H7F4 350 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 ZNF160Q9HCG1 818 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 RETNQ9HD89 108 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 MYOZ1Q9NP98 299 aaPredicted RBP1.78□□□□□ -2.12
VPS50-219ENST00000495039 C8orf17Q9NRJ1 99 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 RRP15Q9Y3B9 282 aaKnown RBP1.78□□□□□ -2.12
VPS50-219ENST00000495039 GPR179Q6PRD1 2367 aa1.78□□□□□ -2.12
VPS50-219ENST00000495039 OTOGLQ3ZCN5 2332 aa1.78□□□□□ -2.13
VPS50-219ENST00000495039 FHOD3Q2V2M9 1422 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 IGKV1-8A0A0C4DH67 115 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 CTAGE15A4D2H0 777 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 NCBP2LA6PVI3 153 aaKnown RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 GABRR3A8MPY1 467 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 K7EM74 188 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 EIF1BO60739 113 aaKnown RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 AQP8O94778 261 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 OR2F2O95006 317 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 CCNB2O95067 398 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 OR1E1P30953 314 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 TALDO1P37837 337 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 EIF1P41567 113 aaKnown RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 UQCRFS1P47985 274 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 CCNG1P51959 295 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 CRISP1P54107 249 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 RPL23P62829 140 aaKnown RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 RNASE13Q5GAN3 156 aaKnown RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 CTAGE6Q86UF2 777 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 TTC29Q8NA56 475 aaPredicted RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 OR10G6Q8NH81 332 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 MCUR1Q96AQ8 359 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 NRBF2Q96F24 287 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 COL21A1Q96P44 957 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 ZNF317Q96PQ6 595 aaPredicted RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 XPO6Q96QU8 1125 aaKnown RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 GGTLC1Q9BX51 225 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 ZYG11BQ9C0D3 744 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 ACTR3CQ9C0K3 210 aaPredicted RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 BEX1Q9HBH7 125 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 MRM3Q9HC36 420 aaKnown RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 LYARQ9NX58 379 aaKnown RBP1.77□□□□□ -2.13
VPS50-219ENST00000495039 CBY1Q9Y3M2 126 aa1.77□□□□□ -2.13
VPS50-219ENST00000495039 SMIM26A0A096LP01 95 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 IGHV1-69DA0A0B4J2H0 117 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 IGHV7-4-1A0A0J9YVY3 117 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 KRBOX1C9JBD0 128 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 NDUFC2-KCTD14E9PQ53 114 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 H7C1H1 209 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 K7EMT4 169 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 POLR1CO15160 346 aaPredicted RBP1.76□□□□□ -2.13
VPS50-219ENST00000495039 CHMP2AO43633 222 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 CDH16O75309 829 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 PAHP00439 452 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 RNASE2P10153 161 aaKnown RBP1.76□□□□□ -2.13
VPS50-219ENST00000495039 CSNK2A2P19784 350 aaPredicted RBP1.76□□□□□ -2.13
VPS50-219ENST00000495039 SYKP43405 635 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 GFERP55789 205 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 ZNF121P58317 390 aaPredicted RBP1.76□□□□□ -2.13
VPS50-219ENST00000495039 RPS15P62841 145 aaKnown RBP1.76□□□□□ -2.13
VPS50-219ENST00000495039 CYP24A1Q07973 514 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 MERTKQ12866 999 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 IDI1Q13907 227 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 NCF4Q15080 339 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 RBMY1FQ15415 496 aaKnown RBP1.76□□□□□ -2.13
VPS50-219ENST00000495039 HSDL1Q3SXM5 330 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 YIF1BQ5BJH7 314 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 SPANXN2Q5MJ10 180 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 H3F3CQ6NXT2 135 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 METAP1DQ6UB28 335 aaPredicted RBP1.76□□□□□ -2.13
VPS50-219ENST00000495039 SPESP1Q6UW49 350 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 SCD5Q86SK9 330 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 LUZP2Q86TE4 346 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 BBS5Q8N3I7 341 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 OR9G4Q8NGQ1 327 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 C8orf44Q96CB5 159 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 PRRC1Q96M27 445 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 RNF145Q96MT1 663 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 PANX1Q96RD7 426 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 TMEM38AQ9H6F2 299 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 AGPAT4Q9NRZ5 378 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 RHBDL2Q9NX52 303 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 PTTG3PQ9NZH4 202 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 SIGLEC9Q9Y336 463 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 DOCK8Q8NF50 2099 aa1.76□□□□□ -2.13
VPS50-219ENST00000495039 A0A075B6Q4 140 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 A6NDN8 102 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 OR5H1A6NKK0 313 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 PDZK1P1A8MUH7 402 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 LGALS9O00182 355 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 PLPP1O14494 284 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 SLC9A3R1O14745 358 aaPredicted RBP1.75□□□□□ -2.13
VPS50-219ENST00000495039 GLSO94925 669 aaPredicted RBP1.75□□□□□ -2.13
VPS50-219ENST00000495039 CD160O95971 181 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 HPRT1P00492 218 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 IGLV3-25P01717 112 aa1.75□□□□□ -2.13
VPS50-219ENST00000495039 IGHV3-11P01762 117 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms