RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PRODHO43272 600 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 APOC1P02654 83 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 FAM157CP0CG43 387 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 HSD11B1P28845 292 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 GRB2P62993 217 aaKnown RBP14.96□□□□□ -0.01
HDAC4-211ENST00000494800 CDK5Q00535 292 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 EIF2B1Q14232 305 aaKnown RBP14.96□□□□□ -0.01
HDAC4-211ENST00000494800 ATP6AP1Q15904 470 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 RSPO1Q2MKA7 263 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-211ENST00000494800 ACSM5Q6NUN0 579 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 PLBD1Q6P4A8 553 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 CCDC121Q6ZUS5 278 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 GLCCI1Q86VQ1 547 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 OR6N2Q8NGY6 317 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 UTP4Q969X6 686 aaKnown RBP14.96□□□□□ -0.01
HDAC4-211ENST00000494800 KCNJ15Q99712 375 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 SOX7Q9BT81 388 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 TOR3AQ9H497 397 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 SP140LQ9H930 580 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 MED20Q9H944 212 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 NTN4Q9HB63 628 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 TREM2Q9NZC2 230 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 ENOPH1Q9UHY7 261 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 NOP16Q9Y3C1 178 aaKnown RBP14.96□□□□□ -0.01
HDAC4-211ENST00000494800 WIPI2Q9Y4P8 454 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 CACNG2Q9Y698 323 aa14.96□□□□□ -0.01
HDAC4-211ENST00000494800 NAV3Q8IVL0 2385 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 ISPDA4D126 451 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 IQCF6A8MYZ5 107 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 IFNL4K9M1U5 179 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 IGFBP5P24593 272 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 SRP9P49458 86 aaKnown RBP14.95□□□□□ -0.02
HDAC4-211ENST00000494800 RAD23AP54725 363 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 DVL1P1P54792 670 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-211ENST00000494800 GK2Q14410 553 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-211ENST00000494800 KLHL12Q53G59 568 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 FAM120AOSQ5T036 256 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 LINC01590Q5TEZ4 76 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 Q6ZR03 302 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 PRIMA1Q86XR5 153 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 ZDHHC13Q8IUH4 622 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 PARP8Q8N3A8 854 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 BHLHE23Q8NDY6 225 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 OR10S1Q8NGN2 331 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 OR51F2Q8NH61 342 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 SPRYD4Q8WW59 207 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-211ENST00000494800 OR2V2Q96R30 315 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 GAL3ST1Q99999 423 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 OPA3Q9H6K4 179 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 ZNF665Q9H7R5 613 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 SLC25A19Q9HC21 320 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 KRT84Q9NSB2 600 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 TMEM100Q9NV29 134 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 PPP1R3CQ9UQK1 317 aa14.95□□□□□ -0.02
HDAC4-211ENST00000494800 MSMBP08118 114 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 SRD5A1P18405 259 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 OTX1P32242 354 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-211ENST00000494800 CRISP1P54107 249 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 RPS7P62081 194 aaKnown RBP14.94□□□□□ -0.02
HDAC4-211ENST00000494800 ESRRGP62508 458 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 SNAPC1Q16533 368 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 SLC35D3Q5M8T2 416 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 FAHD1Q6P587 224 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 RHOUQ7L0Q8 258 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 DPY19L4Q7Z388 723 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 NAA40Q86UY6 237 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 ZNF283Q8N7M2 679 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 ST7LQ8TDW4 575 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 ITLN1Q8WWA0 313 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 DUS3LQ96G46 650 aaKnown RBP14.94□□□□□ -0.02
HDAC4-211ENST00000494800 SLC30A2Q9BRI3 323 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 SLC22A4Q9H015 551 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 TMEM106BQ9NUM4 274 aa14.94□□□□□ -0.02
HDAC4-211ENST00000494800 TMEFF2Q9UIK5 374 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-211ENST00000494800 WNT9BO14905 357 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 XRCC2O43543 280 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 PRKXP51817 358 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 CR1LQ2VPA4 569 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 SPATC1Q76KD6 591 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 CXXC5Q7LFL8 322 aaKnown RBP14.93□□□□□ -0.02
HDAC4-211ENST00000494800 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-211ENST00000494800 CPOQ8IVL8 374 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 ZNF454Q8N9F8 522 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 OR10AD1Q8NGE0 317 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 ZMYND19Q96E35 227 aaPredicted RBP14.93□□□□□ -0.02
HDAC4-211ENST00000494800 MARCH7Q9H992 704 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 TVP23BQ9NYZ1 205 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 N6AMT1Q9Y5N5 214 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 NPTNQ9Y639 398 aa14.93□□□□□ -0.02
HDAC4-211ENST00000494800 CHD3Q12873 2000 aaKnown RBP14.93□□□□□ -0.02
HDAC4-211ENST00000494800 GGT3PA6NGU5 568 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 LRRC30A6NM36 301 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 CX3CR1P49238 355 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 DAPP51397 102 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 LMO4P61968 165 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 SNAI3Q3KNW1 292 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 LCN1P1Q5VSP4 162 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 TMEM236Q5W0B7 351 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 TIGD4Q8IY51 512 aa14.92□□□□□ -0.02
HDAC4-211ENST00000494800 SPICQ8N5J4 248 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms