RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ZNF708P17019 499 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 RPS4XP62701 263 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SP3Q02447 781 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ARSJQ5FYB0 599 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 SOHLH1Q5JUK2 328 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 RPUSD3Q6P087 351 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 MRPL41Q8IXM3 137 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 GCNT2Q8N0V5 402 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 NPEPL1Q8NDH3 523 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF563Q8TA94 476 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 DDIT4LQ96D03 193 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 BPIFA2Q96DR5 249 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF845Q96IR2 970 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LINC00615Q96LM1 132 aaPredicted RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 YPEL2Q96QA6 119 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 LMF1Q96S06 567 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 URM1Q9BTM9 101 aaKnown RBP4.3□□□□□ -1.72
PRKD3-210ENST00000494667 KIR3DX1Q9H7L2 352 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 GNG8Q9UK08 70 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 ENTPD2Q9Y5L3 495 aa4.3□□□□□ -1.72
PRKD3-210ENST00000494667 TRBV23OR9-2A0A075B6M9 112 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 CLEC18AA5D8T8 446 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 DUXAA6NLW8 204 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 HSPA12AO43301 675 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 STK17BO94768 372 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 TRGC2P03986 189 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 MRPL3P09001 348 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 G0S2P27469 103 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 AQP2P41181 271 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 TGM3Q08188 693 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 MORN2Q502X0 79 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 DPY19L2P2Q6ZN68 376 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 MEX3DQ86XN8 651 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 SUMF2Q8NBJ7 301 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 CLEC18CQ8NCF0 446 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 GAL3ST3Q96A11 431 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 DCBLD2Q96PD2 775 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 SYNPO2LQ9H987 977 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 SLC13A4Q9UKG4 626 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 OBSL1O75147 1896 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 A0A1W2PPK0 400 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 MEGF11A6BM72 1044 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 A6NIZ1 184 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 A6NJY4 79 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 PRR32B1ATL7 298 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 CYB5R3P00387 301 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ERCC1P07992 297 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ESDP10768 282 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 IRF1P10914 325 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 CEACAM1P13688 526 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ST6GAL1P15907 406 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 NTSP30990 170 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ECI1P42126 302 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 RPP30P78346 268 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 PMPCAQ10713 525 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 CYB5R2Q6BCY4 276 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ASPHD2Q6ICH7 369 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 TEX43Q6ZNM6 134 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 Q7L0L9 218 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 THNSL2Q86YJ6 484 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 OR1N1Q8NGS0 311 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 OR9A1PQ8NGU1 263 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM170AQ8WVE7 144 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 COL26A1Q96A83 441 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 FGGYQ96C11 551 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF689Q96CS4 500 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 DTD2Q96FN9 168 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 MIEN1Q9BRT3 115 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ATG101Q9BSB4 218 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 AGMATQ9BSE5 352 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 REPIN1Q9BWE0 567 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 NELFAQ9H3P2 528 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 SLC2A4RGQ9NR83 387 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 PLSCR2Q9NRY7 297 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 GPR173Q9NS66 373 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ZCCHC3Q9NUD5 404 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 DECR2Q9NUI1 292 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 MRM2Q9UI43 246 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 TMED7Q9Y3B3 224 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 A0A087WZY1 265 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 A0A0B4J2E0 115 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 A0A1B0GX12 115 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 RAMP1O60894 148 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 NXPH2O95156 264 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ASGR1P07306 291 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 GSTP1P09211 210 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 F3P13726 295 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 HOXC12P31275 282 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 SUPT4H1P63272 117 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 QRFPP83859 136 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 PAX5Q02548 391 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 HSPB3Q12988 150 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ATXN7L3Q14CW9 347 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ZIC1Q15915 447 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 LRRC37A5PQ49AS3 106 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 C10orf120Q5SQS8 335 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 OGFOD3Q6PK18 319 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms