RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 WDFY1Q8IWB7 410 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 TTC29Q8NA56 475 aaPredicted RBP1.91□□□□□ -2.1
SMC4-223ENST00000493695 OR11H7Q8NGC8 314 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 OR56A4Q8NGH8 313 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 LILRB4Q8NHJ6 448 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 FAM81AQ8TBF8 368 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 APH1BQ8WW43 257 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 TCEAL3Q969E4 200 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 RBMXL1Q96E39 390 aaKnown RBP1.91□□□□□ -2.1
SMC4-223ENST00000493695 L3HYPDHQ96EM0 354 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 NRBF2Q96F24 287 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 RNF157Q96PX1 679 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 HSD17B10Q99714 261 aaKnown RBP1.91□□□□□ -2.1
SMC4-223ENST00000493695 FGF23Q9GZV9 251 aaPredicted RBP1.91□□□□□ -2.1
SMC4-223ENST00000493695 EDA2RQ9HAV5 297 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 MRPS30Q9NP92 439 aaKnown RBP1.91□□□□□ -2.1
SMC4-223ENST00000493695 MED4Q9NPJ6 270 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 GCNT4Q9P109 453 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 SLC17A7Q9P2U7 560 aa1.91□□□□□ -2.1
SMC4-223ENST00000493695 IGHV3-72A0A0B4J1Y9 119 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ZNF850A8MQ14 1090 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ERI3O43414 337 aaKnown RBP1.9□□□□□ -2.11
SMC4-223ENST00000493695 SLC22A5O76082 557 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 GLSO94925 669 aaPredicted RBP1.9□□□□□ -2.11
SMC4-223ENST00000493695 LSM8O95777 96 aaKnown RBP1.9□□□□□ -2.11
SMC4-223ENST00000493695 HPRT1P00492 218 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 HBE1P02100 147 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 DCNP07585 359 aaKnown RBP1.9□□□□□ -2.11
SMC4-223ENST00000493695 TACSTD2P09758 323 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 UQCRFS1P47985 274 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ZNF616Q08AN1 781 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ILKQ13418 452 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 TPTE2P1Q5T6R2 138 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ADNP2Q6IQ32 1131 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ZFP1Q6P2D0 407 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 UNQ9165/PRO28630Q6UXU0 137 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 APRG1Q8IVJ8 170 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 FAM71AQ8IYT1 594 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 C8orf31Q8N9H6 132 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 SPANXA2-OT1Q8N9U9 137 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 OR6Q1Q8NGQ2 317 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 OR52P1PQ8NH57 321 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 OR10G6Q8NH81 332 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 SLC25A46Q96AG3 418 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ECHDC3Q96DC8 303 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 BTN2A3PQ96KV6 586 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ZNF317Q96PQ6 595 aaPredicted RBP1.9□□□□□ -2.11
SMC4-223ENST00000493695 TIMM29Q9BSF4 260 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ULBP2Q9BZM5 246 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 UCK2Q9BZX2 261 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 C1orf198Q9H425 327 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ZNF442Q9H7R0 627 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 ACP6Q9NPH0 428 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 C20orf96Q9NUD7 363 aaPredicted RBP1.9□□□□□ -2.11
SMC4-223ENST00000493695 TRMT112Q9UI30 125 aaKnown RBP1.9□□□□□ -2.11
SMC4-223ENST00000493695 RCL1Q9Y2P8 373 aaKnown RBP1.9□□□□□ -2.11
SMC4-223ENST00000493695 YEATS2Q9ULM3 1422 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 PCDH11XQ9BZA7 1347 aa1.9□□□□□ -2.11
SMC4-223ENST00000493695 NUP214P35658 2090 aaPredicted RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 IGHV7-4-1A0A0J9YVY3 117 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 C5orf63A6NC05 138 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 M0R3G1 203 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 SLC9A3R1O14745 358 aaPredicted RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 LSM1O15116 133 aaKnown RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 NVLO15381 856 aaKnown RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 FGFR1OPO95684 399 aaKnown RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 PGA5P0DJD9 388 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 USF1P22415 310 aaPredicted RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 GALP22466 123 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 LOXP28300 417 aaPredicted RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 RBM34P42696 430 aaKnown RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 CDKN2DP55273 166 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 RPL23P62829 140 aaKnown RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 CDK5Q00535 292 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 NCF4Q15080 339 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 MPV17L2Q567V2 206 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 GCSAMLQ5JQS6 135 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 DNLZQ5SXM8 178 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 TMEM53Q6P2H8 277 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 SNX20Q7Z614 316 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 MRPL55Q7Z7F7 128 aaKnown RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 MYOCDQ8IZQ8 938 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 CCDC148Q8NFR7 591 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 OR10W1Q8NGF6 305 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 OR52E5Q8NH55 327 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 LRRC29Q8WV35 223 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 GSDMAQ96QA5 445 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 FOXC2Q99958 501 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 BPIFA3Q9BQP9 254 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 C11orf70Q9BRQ4 267 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 SLC38A10Q9HBR0 1119 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 EXOSC4Q9NPD3 245 aaKnown RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 PTTG3PQ9NZH4 202 aa1.89□□□□□ -2.11
SMC4-223ENST00000493695 PDP1Q9P0J1 537 aaPredicted RBP1.89□□□□□ -2.11
SMC4-223ENST00000493695 IGHV1-69DA0A0B4J2H0 117 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 H7C1H1 209 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 TNFRSF11BO00300 401 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 PLPP1O14494 284 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 TAAR5O14804 337 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 RDH16O75452 317 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms