RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 AGPAT1Q99943 283 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 GINS3Q9BRX5 216 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 BTBD10Q9BSF8 475 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 DPCDQ9BVM2 203 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RIOK2Q9BVS4 552 aaKnown RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SNHG12Q9BXW3 62 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RNF26Q9BY78 433 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 MAGIXQ9H6Y5 334 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 Q9H8V8 135 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SPHK2Q9NRA0 654 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 FBXO6Q9NRD1 293 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SPANXB1Q9NS25 103 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SLC7A10Q9NS82 523 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 MCUBQ9NWR8 336 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 PILRAQ9UKJ1 303 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 FBXO4Q9UKT5 387 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SAR1BQ9Y6B6 198 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 MYOM3Q5VTT5 1437 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 KTN1Q86UP2 1357 aaKnown RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 NEDD4P46934 1319 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SMIM28A0A1B0GU29 152 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 EXOC1LA0A1B0GW35 172 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ATP6AP2A0A1C7CYW4 349 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 LILRA5A6NI73 299 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 FAM74A7A6NL05 159 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 A8MWP6 167 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF195O14628 629 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ORC5O43913 435 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF780AO75290 641 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ALOX12BO75342 701 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 LRATO95237 230 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 MBPP02686 304 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 AOC1P19801 751 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 TACR1P25103 407 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 FASP25445 335 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RPL12P30050 165 aaKnown RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SPRP35270 261 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 PIGAP37287 484 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF133P52736 654 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RAB8AP61006 207 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RHOBP62745 196 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RPL31P62899 125 aaKnown RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RPL8P62917 257 aaKnown RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SRYQ05066 204 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 DUSP2Q05923 314 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 BCL2L1Q07817 233 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ST3GAL1Q11201 340 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 PLA2G7Q13093 441 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ST3GAL2Q16842 350 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SLC25A52Q3SY17 297 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 FAM74A3Q4VXF1 159 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 CYBRD1Q53TN4 286 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SYT14P1Q58G82 188 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RSBN1Q5VWQ0 802 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ANKRD22Q5VYY1 191 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 DMKNQ6E0U4 476 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 TAPT1Q6NXT6 567 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 STEAP1BQ6NZ63 245 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 TEX261Q6UWH6 196 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF534Q76KX8 674 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 FAM19A5Q7Z5A7 132 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 DTWD1Q8N5C7 304 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ACBD7Q8N6N7 88 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 THAP8Q8NA92 274 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 OR4D11Q8NGI4 311 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 OR6K6Q8NGW6 343 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 OR14A16Q8NHC5 309 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ORAOV1Q8WV07 137 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ATG4AQ8WYN0 398 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 FBXL8Q96CD0 374 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RNF183Q96D59 192 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 DNAJC19Q96DA6 116 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 MOCOSQ96EN8 888 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 PIK3IP1Q96FE7 263 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ADTRPQ96IZ2 230 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 OR7D2Q96RA2 312 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 OR52E6Q96RD3 313 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 APOL4Q9BPW4 351 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 C20orf144Q9BQM9 153 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RPP25Q9BUL9 199 aaKnown RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 TAPBPLQ9BX59 468 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RSPO3Q9BXY4 272 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF385DQ9H6B1 395 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 AKTIPQ9H8T0 292 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 SFXN1Q9H9B4 322 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 ENY2Q9NPA8 101 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 NOX4Q9NPH5 578 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 GDF3Q9NR23 364 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 TECRQ9NZ01 308 aaKnown RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 OPTCQ9UBM4 332 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 PACSIN3Q9UKS6 424 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 POMT2Q9UKY4 750 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 RPL26L1Q9UNX3 145 aaKnown RBP3.68□□□□□ -1.82
BRCA1-220ENST00000492859 A3GALT2U3KPV4 340 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 KDM5DQ9BY66 1539 aa3.68□□□□□ -1.82
BRCA1-220ENST00000492859 KIAA1551Q9HCM1 1747 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 MYH2Q9UKX2 1941 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 DAPK1P53355 1430 aa3.67□□□□□ -1.82
BRCA1-220ENST00000492859 FMN1Q68DA7 1419 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms