RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 KCNJ8Q15842 424 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 SLC18B1Q6NT16 456 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 ZNF771Q7L3S4 317 aaPredicted RBP14□□□□□ -0.17
PDLIM2-217ENST00000491330 LRRC28Q86X40 367 aaPredicted RBP14□□□□□ -0.17
PDLIM2-217ENST00000491330 LINC00346Q8IVM7 164 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 OR10G2Q8NGC3 310 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 OR9Q2Q8NGE9 314 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 TEX47Q8TBZ9 253 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 GIPC3Q8TF64 312 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 CANT1Q8WVQ1 401 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 NRBF2Q96F24 287 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 CLPTM1LQ96KA5 538 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 TSSK6Q9BXA6 273 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 C1QTNF5Q9BXJ0 243 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 ZNF556Q9HAH1 456 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 NTN4Q9HB63 628 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 PATZ1Q9HBE1 687 aaKnown RBP14□□□□□ -0.17
PDLIM2-217ENST00000491330 MIOXQ9UGB7 285 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 POMPQ9Y244 141 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 COL6A5A8TX70 2615 aa14□□□□□ -0.17
PDLIM2-217ENST00000491330 YLPM1P49750 1951 aaKnown RBP14□□□□□ -0.17
PDLIM2-217ENST00000491330 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 OR6C68A6NDL8 312 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 IQCF6A8MYZ5 107 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 M0R135 149 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 DCTN6O00399 190 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 GSC2O15499 205 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 IGHV2-70P01814 119 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 ZNF3P17036 446 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 ACTG1P63261 375 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 HLXQ14774 488 aaPredicted RBP13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 OTPQ5XKR4 325 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 DRAM2Q6UX65 266 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 BTNL3Q6UXE8 466 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 C12orf54Q6X4T0 127 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 USP43Q70EL4 1123 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 C1QL2Q7Z5L3 287 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 SPATA24Q86W54 205 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 SPERTQ8NA61 448 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 BHLHE23Q8NDY6 225 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 ZNF799Q96GE5 643 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 MEGF10Q96KG7 1140 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 COPS4Q9BT78 406 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 RBM4Q9BWF3 364 aaKnown RBP13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 OPA3Q9H6K4 179 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 EGLN3Q9H6Z9 239 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 G6PC2Q9NQR9 355 aa13.99□□□□□ -0.17
PDLIM2-217ENST00000491330 LOC105371242A0A075B767 164 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 GGT3PA6NGU5 568 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 H3BN98 237 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 TMEM178BH3BS89 294 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 GPANK1O95872 356 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 ACSM4P0C7M7 580 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 ANXA8P13928 327 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 SNCBQ16143 134 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 ARMCX4Q5H9R4 360 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 Q6ZR03 302 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 CELF2-AS1Q8N7Q2 184 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 SLCO4A1Q96BD0 722 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 SLC30A2Q9BRI3 323 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 POFUT1Q9H488 388 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 GCM1Q9NP62 436 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 TRIM36Q9NQ86 728 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 CENPMQ9NSP4 180 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 DNAJB9Q9UBS3 223 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 LRCH1Q9Y2L9 728 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 AUP1Q9Y679 476 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 U3KQV3 271 aa13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.98□□□□□ -0.17
PDLIM2-217ENST00000491330 GMDSO60547 372 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 E2F6O75461 281 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 SPARCP09486 303 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 RPS2P15880 293 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 HSD11B1P28845 292 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 PYCR1P32322 319 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 ENTPD1P49961 510 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 SLC25A1P53007 311 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 GRB2P62993 217 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 OR8G1Q15617 311 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 ZNF181Q2M3W8 571 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 CFAP77Q6ZQR2 320 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 COLCA1Q6ZS62 124 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 KLBQ86Z14 1044 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 CYB561A3Q8NBI2 242 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 OR10AD1Q8NGE0 317 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 OR6K6Q8NGW6 343 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 OTULINQ96BN8 352 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 FN3KQ9H479 309 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 TOR3AQ9H497 397 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 FN3KRPQ9HA64 309 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 KIF17Q9P2E2 1029 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 MALRD1Q5VYJ5 2156 aa13.97□□□□□ -0.17
PDLIM2-217ENST00000491330 XRCC2O43543 280 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 FKBP6O75344 327 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 CFL1P23528 166 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 DDOSTP39656 456 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 MMP16P51512 607 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 GNB2P62879 340 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 CBX1P83916 185 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 GK2Q14410 553 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms