RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PARD6GQ9BYG4 376 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 DERL2Q9GZP9 239 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CENPHQ9H3R5 247 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 WDR54Q9H977 334 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 MRM3Q9HC36 420 aaKnown RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 AGPAT4Q9NRZ5 378 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CCDC59Q9P031 241 aaKnown RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 RAB26Q9ULW5 256 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 RCL1Q9Y2P8 373 aaKnown RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 PRG3Q9Y2Y8 225 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 RPL36Q9Y3U8 105 aaKnown RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CDC42BPBQ9Y5S2 1711 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 MAP3K15Q6ZN16 1313 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 FHOD3Q2V2M9 1422 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 TSPAN11A1L157 253 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 FAM166BA8MTA8 275 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 GOLGA8MH3BSY2 632 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 CDC7O00311 574 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 GPR171O14626 319 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 MPDU1O75352 247 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 EEDO75530 441 aaKnown RBP3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 RCBTB2O95199 551 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 DEXIO95424 95 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC35E2BP0CK96 405 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 PSKH1P11801 424 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 ICAM2P13598 275 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC2A5P22732 501 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACTR1BP42025 376 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 CCR8P51685 355 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 GPX6P59796 221 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 MRPS25P82663 173 aaKnown RBP3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 PGGHGQ32M88 737 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 NDUFAF6Q330K2 333 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 PARP15Q460N3 678 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 DNAL1Q4LDG9 190 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 CARD16Q5EG05 197 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 CASC10Q5T4H9 136 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 FAHD1Q6P587 224 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 LINC00336Q6ZUF6 198 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 SSX7Q7RTT5 188 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNF429Q86V71 674 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 RDH10Q8IZV5 341 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 KIF2BQ8N4N8 673 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 TTLQ8NG68 377 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR10G3Q8NGC4 313 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR6K6Q8NGW6 343 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR9G1Q8NH87 305 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNF502Q8TBZ5 544 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 CXorf40AQ8TE69 158 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 IFT81Q8WYA0 676 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 NDRG1Q92597 394 aaKnown RBP3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 ESR2Q92731 530 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 IL22RA2Q969J5 263 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 PAGE5Q96GU1 130 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 CIB1Q99828 191 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 BEX2Q9BXY8 128 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 EML4Q9HC35 981 aaKnown RBP3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 WSB1Q9Y6I7 421 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 PLB1Q6P1J6 1458 aa3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 USP42Q9H9J4 1324 aaKnown RBP3.14□□□□□ -1.91
HMGB1P38-201ENST00000490557 NKX2-6A6NCS4 301 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 GOLGA8JA6NMD2 632 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 M0QXV9 152 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 SULT1C2O00338 296 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 CCL21O00585 134 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 AGPAT2O15120 278 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 MBTPS2O43462 519 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ADAP1O75689 374 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNF189O75820 626 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 LSM8O95777 96 aaKnown RBP3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 HBE1P02100 147 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 SERPINA5P05154 406 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACSM4P0C7M7 580 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 OCM2P0CE71 109 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 CXCR2P25025 360 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 HLA-DMAP28067 261 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 FMO3P31513 532 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 RFC3P40938 356 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 KIR2DS4P43632 304 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 VDAC2P45880 294 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 GPM6AP51674 278 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 XKP51811 444 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 SLC35B1P78383 322 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 REEP5Q00765 189 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 C2orf80Q0P641 193 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 MED21Q13503 144 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 PSMD5Q16401 504 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 TTMPQ5BVD1 217 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 GPRC6AQ5T6X5 926 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 DUPD1Q68J44 220 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ANKRD26P1Q6NSI1 321 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 APOBEC3HQ6NTF7 200 aaKnown RBP3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 TTC33Q6PID6 262 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 COX15Q7KZN9 410 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNF786Q8N393 782 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ACOT4Q8N9L9 421 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ZNF738Q8NE65 137 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 ATP6V1C2Q8NEY4 427 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR51G1Q8NGK1 321 aa3.13□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR2G2Q8NGZ5 317 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms