RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 SDHAP31040 664 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 NPY4RP50391 375 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 HIST1H3AP68431 136 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 COQ5Q5HYK3 327 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 HIST2H3PS2Q5TEC6 136 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 CD276Q5ZPR3 534 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 GPR139Q6DWJ6 353 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 HIST2H3AQ71DI3 136 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 CELF2-AS1Q8N7Q2 184 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 ERGIC1Q969X5 290 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 FAM46AQ96IP4 442 aaKnown RBP14.06□□□□□ -0.16
TOP3B-217ENST00000489581 RASSF4Q9H2L5 321 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 TCF7L1Q9HCS4 588 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 NRIP3Q9NQ35 241 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 SIGLEC7Q9Y286 467 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 IER3IP1Q9Y5U9 82 aa14.06□□□□□ -0.16
TOP3B-217ENST00000489581 IGHV1-69DA0A0B4J2H0 117 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 LOC100653049A0A140TA62 436 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 C3orf80F5H4A9 247 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 DCTN6O00399 190 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 PTP4A3O75365 173 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 KRT34O76011 436 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 CLPXO76031 633 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 ZNF682O95780 498 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 IGHV1-69P01742 117 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 LIPFP07098 398 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 CD200P41217 278 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 CDKN2AP42771 156 aaKnown RBP14.05□□□□□ -0.16
TOP3B-217ENST00000489581 RAD23AP54725 363 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 PROK1P58294 105 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 RPL15P61313 204 aaKnown RBP14.05□□□□□ -0.16
TOP3B-217ENST00000489581 DBPQ10586 325 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-217ENST00000489581 KLF10Q13118 480 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 GK2Q14410 553 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-217ENST00000489581 METTL11BQ5VVY1 283 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 COLCA1Q6ZS62 124 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 NAA40Q86UY6 237 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 FAM110DQ8TAY7 271 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-217ENST00000489581 LHX4Q969G2 390 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 SLCO4A1Q96BD0 722 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 TMEM120AQ9BXJ8 343 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 TRIM15Q9C019 465 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 SMURF1Q9HCE7 757 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 GID8Q9NWU2 228 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 RNF7Q9UBF6 113 aa14.05□□□□□ -0.16
TOP3B-217ENST00000489581 TET2Q6N021 2002 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-217ENST00000489581 A0A0U1RQK1 487 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 SLC22A31A6NKX4 558 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 BBIP1A8MTZ0 92 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 F5H5K5 113 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 ADAM20O43506 726 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 ACSM4P0C7M7 580 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 ARF6P62330 175 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 OR8G1Q15617 311 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 IFI44LQ53G44 452 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 FKBP9P1Q75LS8 142 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 LINC00346Q8IVM7 164 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 PDZD9Q8IXQ8 264 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 SCCPDHQ8NBX0 429 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 SIKE1Q9BRV8 207 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 SIRPDQ9H106 197 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 SRA1Q9HD15 236 aaKnown RBP14.04□□□□□ -0.16
TOP3B-217ENST00000489581 TMEM5Q9Y2B1 443 aa14.04□□□□□ -0.16
TOP3B-217ENST00000489581 LGALS8O00214 317 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 LCATP04180 440 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 CA6P23280 308 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 CRABP1P29762 137 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 IER3P46695 156 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 SF3A3Q12874 501 aaKnown RBP eCLIP14.03□□□□□ -0.167e-11■■■■□ 19.6
TOP3B-217ENST00000489581 COX10Q12887 443 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 OR8B8Q15620 311 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 KCNJ8Q15842 424 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 KRTAP27-1Q3LI81 207 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 CFAP77Q6ZQR2 320 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 PGAP1Q75T13 922 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 ADCK1Q86TW2 530 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 PNLDC1Q8NA58 520 aaKnown RBP14.03□□□□□ -0.16
TOP3B-217ENST00000489581 SLC7A13Q8TCU3 470 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 SPRYD4Q8WW59 207 aaPredicted RBP14.03□□□□□ -0.16
TOP3B-217ENST00000489581 GPX7Q96SL4 187 aaPredicted RBP14.03□□□□□ -0.16
TOP3B-217ENST00000489581 PITX2Q99697 317 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 FN3KRPQ9HA64 309 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 CMTM6Q9NX76 183 aa14.03□□□□□ -0.16
TOP3B-217ENST00000489581 PLXNB1O43157 2135 aa14.02□□□□□ -0.16
TOP3B-217ENST00000489581 GYPAP02724 150 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 MDH1P40925 334 aaKnown RBP14.02□□□□□ -0.17
TOP3B-217ENST00000489581 RPS6KA3P51812 740 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 FXYD6P3P58550 94 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 MALLQ13021 153 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 MAPRE2Q15555 327 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 PGM2L1Q6PCE3 622 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 DNM1P34Q6PK57 102 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 Q6ZSV7 163 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 CBLL1Q75N03 491 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 TSEN54Q7Z6J9 526 aaKnown RBP14.02□□□□□ -0.17
TOP3B-217ENST00000489581 ZSCAN4Q8NAM6 433 aaPredicted RBP14.02□□□□□ -0.17
TOP3B-217ENST00000489581 RSRC1Q96IZ7 334 aaKnown RBP14.02□□□□□ -0.17
TOP3B-217ENST00000489581 HSH2DQ96JZ2 352 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 B9D1Q9UPM9 204 aa14.02□□□□□ -0.17
TOP3B-217ENST00000489581 IGLV1-36A0A0B4J1U3 117 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 199.3 ms