RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ZNF771Q7L3S4 317 aaPredicted RBP14.76□□□□□ -0.05
MDC1-206ENST00000489540 OTOSQ8NHW6 89 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 ZNF582Q96NG8 517 aaPredicted RBP14.76□□□□□ -0.05
MDC1-206ENST00000489540 GABARAPL3Q9BY60 117 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 SP140LQ9H930 580 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 MSL2Q9HCI7 577 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 ORC6Q9Y5N6 252 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 CSPG4Q6UVK1 2322 aa14.76□□□□□ -0.05
MDC1-206ENST00000489540 IGHV1-69-2A0A0G2JMI3 117 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 PRKXP51817 358 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 OR2T2Q6IF00 324 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 USP51Q70EK9 711 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 SLC16A9Q7RTY1 509 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 TCEANCQ8N8B7 351 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 OR8G5Q8NG78 346 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 TMEM163Q8TC26 289 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 THEM6Q8WUY1 208 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 YIPF5Q969M3 257 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 ELMOD3Q96FG2 381 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 YIPF3Q9GZM5 350 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 RIBC2Q9H4K1 309 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 USE1Q9NZ43 259 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 IGHV4-61A0A0C4DH41 118 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 CD5LO43866 347 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 SELENOFO60613 162 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 RP2O75695 350 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 ALPLP05186 524 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 LYNP07948 512 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 TACSTD2P09758 323 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 HSD11B1P28845 292 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 POLR2IP36954 125 aaKnown RBP14.75□□□□□ -0.05
MDC1-206ENST00000489540 GPR6P46095 362 aaPredicted RBP14.75□□□□□ -0.05
MDC1-206ENST00000489540 CHN2P52757 468 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 TNFAIP6P98066 277 aaPredicted RBP14.75□□□□□ -0.05
MDC1-206ENST00000489540 GK2Q14410 553 aaPredicted RBP14.75□□□□□ -0.05
MDC1-206ENST00000489540 HFEQ30201 348 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 AADACL4Q5VUY2 407 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 NXNL2Q5VZ03 156 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 SPATC1Q76KD6 591 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 MEPCEQ7L2J0 689 aaKnown RBP14.75□□□□□ -0.05
MDC1-206ENST00000489540 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.75□□□□□ -0.05
MDC1-206ENST00000489540 ZNF283Q8N7M2 679 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 OR13G1Q8NGZ3 307 aa14.75□□□□□ -0.05
MDC1-206ENST00000489540 ZNF275Q9NSD4 429 aaPredicted RBP14.75□□□□□ -0.05
MDC1-206ENST00000489540 CCDC182A6NF36 153 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 IQCF6A8MYZ5 107 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 CDC14BO60729 498 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 H2BFMP0C1H6 154 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 OPRL1P41146 370 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 ALDH3A2P51648 485 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 RAD23AP54725 363 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 RIPPLY3P57055 190 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 KRTAP1-1Q07627 177 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 CYB5R2Q6BCY4 276 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 Q6ZR03 302 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 PGAP1Q75T13 922 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 MRPL21Q7Z2W9 205 aaKnown RBP14.74□□□□□ -0.05
MDC1-206ENST00000489540 OR5AS1Q8N127 324 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 PQLC1Q8N2U9 271 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 OR2Z1Q8NG97 314 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 STMN2Q93045 179 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 IL4I1Q96RQ9 567 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 C9orf16Q9BUW7 83 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 LAMP5Q9UJQ1 280 aa14.74□□□□□ -0.05
MDC1-206ENST00000489540 SLC22A31A6NKX4 558 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 EI24O14681 340 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 PPIHO43447 177 aaKnown RBP14.73□□□□□ -0.05
MDC1-206ENST00000489540 LILRA1O75019 489 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 TNFRSF1AP19438 455 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 ALOX5APP20292 161 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 NAA10P41227 235 aaPredicted RBP14.73□□□□□ -0.05
MDC1-206ENST00000489540 GZMKP49863 264 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 SLC3A1Q07837 685 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 SNAI3Q3KNW1 292 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 GID4Q8IVV7 300 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 CBR4Q8N4T8 237 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 OR8J1Q8NGP2 316 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 HPS1Q92902 700 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 AMELYQ99218 206 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 SLC30A2Q9BRI3 323 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 REPIN1Q9BWE0 567 aaKnown RBP14.73□□□□□ -0.05
MDC1-206ENST00000489540 OPA3Q9H6K4 179 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 TMEM100Q9NV29 134 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 IL19Q9UHD0 177 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 TMEM14AQ9Y6G1 99 aa14.73□□□□□ -0.05
MDC1-206ENST00000489540 XRCC2O43543 280 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 CX3CR1P49238 355 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 CDC42P60953 191 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 ZNF92Q03936 586 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 BCDIN3DQ7Z5W3 292 aaKnown RBP14.72□□□□□ -0.05
MDC1-206ENST00000489540 OR52H1Q8NGJ2 320 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 SPRYD4Q8WW59 207 aaPredicted RBP14.72□□□□□ -0.05
MDC1-206ENST00000489540 TRUB1Q8WWH5 349 aaKnown RBP14.72□□□□□ -0.05
MDC1-206ENST00000489540 ASB17Q8WXJ9 295 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 CCL17Q92583 94 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 NIPAL2Q9H841 368 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 HAO2Q9NYQ3 351 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 N6AMT1Q9Y5N5 214 aa14.72□□□□□ -0.05
MDC1-206ENST00000489540 M0R129 80 aa14.71□□□□□ -0.05
MDC1-206ENST00000489540 BAG2O95816 211 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms