RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 PNRC2Q9NPJ4 139 aaKnown RBP4.89□□□□□ -1.63
ATG4A-208ENST00000489247 B3GAT2Q9NPZ5 323 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 POLE4Q9NR33 117 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 SLC17A5Q9NRA2 495 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 DEPPQ9NTK1 212 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 DDX28Q9NUL7 540 aaKnown RBP4.89□□□□□ -1.63
ATG4A-208ENST00000489247 FAM206AQ9NX38 181 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 NUFIP1Q9UHK0 495 aaKnown RBP4.89□□□□□ -1.63
ATG4A-208ENST00000489247 DKKL1Q9UK85 242 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 IKZF2Q9UKS7 526 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 BOKQ9UMX3 212 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-208ENST00000489247 CAMK2AQ9UQM7 478 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 LRP12Q9Y561 859 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 LHFPL6Q9Y693 200 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 V9GY05 133 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 OTOGLQ3ZCN5 2332 aa4.89□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF318Q5VUA4 2279 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 A0A087WV48 116 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SMIM30A4D0T7 59 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF726A6NNF4 738 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF716A6NP11 495 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF878C9JN71 531 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 PSMD9O00233 223 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SMAD9O15198 467 aaKnown RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 RAMP1O60894 148 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 RPP14O95059 124 aaKnown RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 TNFSF15O95150 251 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 MPZL1O95297 269 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 IGLV3-1P01715 115 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 HLA-DQA2P01906 255 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 FTH1P19P0C7X4 201 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SLC2A2P11168 524 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SPNP16150 400 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OTX1P32242 354 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SFTPDP35247 375 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 TALDO1P37837 337 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 CASRP41180 1078 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SLC6A9P48067 706 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 PITPNBP48739 271 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 DNASE1L1P49184 302 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 CAPZA1P52907 286 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 CLDN15P56746 228 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 CLDN6P56747 220 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 CLRN1P58418 232 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 MRPS34P82930 218 aaKnown RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 PITPNAQ00169 270 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 MFGE8Q08431 387 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 TCF15Q12870 199 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 MFAP5Q13361 173 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 P2RY14Q15391 338 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 BCL2A1Q16548 175 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 MST1LQ2TV78 715 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 KRTAP27-1Q3LI81 207 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 NRN1LQ496H8 165 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 PYDC2Q56P42 97 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 C1orf100Q5SVJ3 147 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ABHD17BQ5VST6 288 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 RAET1LQ5VY80 246 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 TMEM225Q6GV28 225 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 FAM180AQ6UWF9 173 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 DCXRQ7Z4W1 244 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 KRT77Q7Z794 578 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 CDH26Q8IXH8 852 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 C20orf196Q8IYI0 205 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ELMOD2Q8IZ81 293 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OR8H2Q8N162 312 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 Q8N402 240 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SAMD12Q8N8I0 201 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 MDS2Q8NDY4 140 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 CCDC54Q8NEL0 328 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OR2M7Q8NG81 312 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OR10H5Q8NGA6 315 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OR4M1Q8NGD0 313 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OR5M1Q8NGP8 315 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OR5H6Q8NGV6 325 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OR10AC1Q8NH08 325 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 C15orf40Q8WUR7 153 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SMIM4Q8WVI0 70 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ASB5Q8WWX0 329 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 TMEM106AQ96A25 262 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 PTX4Q96A99 478 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 PNPLA2Q96AD5 504 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 NABP1Q96AH0 204 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 HAVCR1Q96D42 359 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 SLC25A38Q96DW6 304 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 THOC3Q96J01 351 aaKnown RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 C7orf50Q9BRJ6 194 aaKnown RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 TTTY10Q9BZA0 68 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 C11orf54Q9H0W9 315 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 OR10A2Q9H208 303 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 C1orf198Q9H425 327 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 TMEM185BQ9H7F4 350 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF703Q9H7S9 590 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ASCL3Q9NQ33 180 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 TIGARQ9NQ88 270 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 RBFOX1Q9NWB1 397 aaKnown RBP4.88□□□□□ -1.63
ATG4A-208ENST00000489247 GLTPQ9NZD2 209 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 LRFN1Q9P244 771 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 ABI3Q9P2A4 366 aa4.88□□□□□ -1.63
ATG4A-208ENST00000489247 EXTL2Q9UBQ6 330 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms