RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ITGB1BP2Q9UKP3 347 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 IKZF2Q9UKS7 526 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 EDARQ9UNE0 448 aa9.47□□□□□ -0.89
UBE4B-210ENST00000488228 VPS13CQ709C8 3753 aa9.46□□□□□ -0.89
UBE4B-210ENST00000488228 IGLV3-9A0A075B6K5 115 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 A0A1W2PQL4 384 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-210ENST00000488228 M0R233 179 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 IGHV4-39P01824 125 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 GCH1P30793 250 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 SLC15A1P46059 708 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 ART1P52961 327 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 ATP5J2P56134 94 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 ISL1P61371 349 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 MFGE8Q08431 387 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-210ENST00000488228 TMED1Q13445 227 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 NKPD1Q17RQ9 610 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 GFOD2Q3B7J2 385 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF718Q3SXZ3 478 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 GLYATL3Q5SZD4 288 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 DRAM2Q6UX65 266 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 UNQ6126/PRO20091Q6UXV3 157 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 COLCA1Q6ZS62 124 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 FAM57BQ71RH2 274 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 ZCCHC24Q8N2G6 241 aaKnown RBP9.46□□□□□ -0.9
UBE4B-210ENST00000488228 Q96MT0 163 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 SORCS2Q96PQ0 1159 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 OR8B4Q96RC9 309 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 TPK1Q9H3S4 243 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 TAAR3PQ9P1P4 343 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 TMEM14AQ9Y6G1 99 aa9.46□□□□□ -0.9
UBE4B-210ENST00000488228 ZSCAN5BA6NJL1 495 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 SNTNA6NMZ2 147 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 VSTM5A8MXK1 200 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 H0YJX3 145 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 H3BSA7 217 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 H7C417 338 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 J3QRE1 110 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 J3QW42 95 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 PHYHO14832 338 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 TBX1O43435 398 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 LY6HO94772 140 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 IGHV3-13P01766 116 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 ADRA2AP08913 450 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 NAT2P11245 290 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 VHLP40337 213 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 PPOXP50336 477 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 ROM1Q03395 351 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF85Q03923 595 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 PSG7Q13046 419 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 TP53I3Q53FA7 332 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 Q5PR19 223 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 MBNL2Q5VZF2 373 aaKnown RBP9.45□□□□□ -0.9
UBE4B-210ENST00000488228 LAIR2Q6ISS4 152 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 KCTD18Q6PI47 426 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-210ENST00000488228 PRSS45Q7RTY3 260 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-210ENST00000488228 KRTAP1-3Q8IUG1 177 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF679Q8IYX0 411 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 OR5AS1Q8N127 324 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 BHLHE23Q8NDY6 225 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 ASB17Q8WXJ9 295 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 CMBLQ96DG6 245 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 MNTQ99583 582 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 VRK1Q99986 396 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-210ENST00000488228 GSX2Q9BZM3 304 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 ACOXLQ9NUZ1 547 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF701Q9NV72 531 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-210ENST00000488228 MRM2Q9UI43 246 aaKnown RBP9.45□□□□□ -0.9
UBE4B-210ENST00000488228 MYRFQ9Y2G1 1151 aa9.45□□□□□ -0.9
UBE4B-210ENST00000488228 CR1P17927 2039 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 TIMM8AO60220 97 aaPredicted RBP9.44□□□□□ -0.9
UBE4B-210ENST00000488228 LILRA1O75019 489 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 NCR1O76036 304 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 RPP14O95059 124 aaKnown RBP9.44□□□□□ -0.9
UBE4B-210ENST00000488228 OR2T7P0C7T2 308 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 EVX1P49640 407 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 RIDAP52758 137 aaKnown RBP9.44□□□□□ -0.9
UBE4B-210ENST00000488228 ACTC1P68032 377 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 ACTA1P68133 377 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF92Q03936 586 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 MALLQ13021 153 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 GK2Q14410 553 aaPredicted RBP9.44□□□□□ -0.9
UBE4B-210ENST00000488228 OR2T2Q6IF00 324 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 FBXW12Q6X9E4 464 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 RHOUQ7L0Q8 258 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 MRPL21Q7Z2W9 205 aaKnown RBP9.44□□□□□ -0.9
UBE4B-210ENST00000488228 THAP5Q7Z6K1 395 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 YIPF7Q8N8F6 280 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 OR8B12Q8NGG6 310 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 OR52I1Q8NGK6 324 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 OR5L1Q8NGL2 311 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 OR2T27Q8NH04 317 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 FBLIM1Q8WUP2 373 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 SNX33Q8WV41 574 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 PGAM5Q96HS1 289 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 COG8Q96MW5 612 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 FOXC2Q99958 501 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 MROQ9BYG7 248 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 MSL2Q9HCI7 577 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 FAM206AQ9NX38 181 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms