RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZBTB18Q99592 522 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 TMEM109Q9BVC6 243 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 NUF2Q9BZD4 464 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 MRPL37Q9BZE1 423 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 C20orf27Q9GZN8 174 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 TPK1Q9H3S4 243 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF385DQ9H6B1 395 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 MEAF6Q9HAF1 191 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 BCL2L10Q9HD36 194 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 B3GAT2Q9NPZ5 323 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 SLC52A3Q9NQ40 469 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF275Q9NSD4 429 aaPredicted RBP3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 AIG1Q9NVV5 245 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 P2RX2Q9UBL9 471 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 FBXL3Q9UKT7 428 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF346Q9UL40 294 aaKnown RBP3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 TCF19Q9Y242 345 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 ZNF443Q9Y2A4 671 aaPredicted RBP3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 IFT52Q9Y366 437 aa3.34□□□□□ -1.87
SNRNP40-205ENST00000486941 MEGF8Q7Z7M0 2845 aa3.34□□□□□ -1.88
SNRNP40-205ENST00000486941 TRAV36DV7A0A075B6V5 113 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 J3QLI3 93 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 M0R3G1 203 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 SDHDO14521 159 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 TM9SF1O15321 606 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PPIHO43447 177 aaKnown RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 TRAF3IP2O43734 574 aaPredicted RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 RP2O75695 350 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 UBL3O95164 117 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 BCL10O95999 233 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PNPP00491 289 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 SERPINA5P05154 406 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 BCHEP06276 602 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 CD79AP11912 226 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ETFAP13804 333 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ETS2P15036 469 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 TCN1P20061 433 aaPredicted RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 EDN2P20800 178 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 GRPRP30550 384 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 CRATP43155 626 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 CRYBB2P43320 205 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ALDH3B1P43353 468 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 NME5P56597 212 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 GALK2Q01415 458 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 IFFO1Q0D2I5 559 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 STX3Q13277 289 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 CHI3L2Q15782 390 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PCGF3Q3KNV8 242 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF311Q5JNZ3 666 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PHYHD1Q5SRE7 291 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 GKAP1Q5VSY0 366 aaPredicted RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 FAM91A1Q658Y4 838 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ATG16L1Q676U5 607 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ACSM5Q6NUN0 579 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 FAHD2BQ6P2I3 314 aaPredicted RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ULK3Q6PHR2 472 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF497Q6ZNH5 498 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 MSANTD1Q6ZTZ1 278 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 MOB3CQ70IA8 216 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PRSS45Q7RTY3 260 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PIWIL3Q7Z3Z3 882 aaKnown RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PXKQ7Z7A4 578 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 LRP11Q86VZ4 500 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 CARM1Q86X55 608 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PARP16Q8N5Y8 322 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC24A4Q8NFF2 622 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 NANPQ8TBE9 248 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 PNPT1Q8TCS8 783 aaKnown RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 MGARPQ8TDB4 240 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 DNAJA4Q8WW22 397 aaPredicted RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC38A4Q969I6 547 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 YIPF5Q969M3 257 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 FAHD2AQ96GK7 314 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF416Q9BWM5 594 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 SUCNR1Q9BXA5 334 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 RMND5AQ9H871 391 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 TPT1P8Q9HAU6 139 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 CACYBPQ9HB71 228 aaKnown RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 LPAR2Q9HBW0 351 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 HINT3Q9NQE9 182 aaKnown RBP3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC6A13Q9NSD5 602 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 NKIRAS2Q9NYR9 191 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 TREM2Q9NZC2 230 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 RPS6KB2Q9UBS0 482 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 SEC14L4Q9UDX3 406 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC7A8Q9UHI5 535 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 POFUT2Q9Y2G5 429 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 NOTCH1P46531 2555 aa3.33□□□□□ -1.88
SNRNP40-205ENST00000486941 TANC2Q9HCD6 1990 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 IGKV1D-42A0A075B6H8 117 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 IGLV3-9A0A075B6K5 115 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 LOC105371242A0A075B767 164 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A087WUJ7 227 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A0G2JMP0 313 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A0X1KG70 313 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A1B0GWA3 101 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A1W2PPW3 197 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 A0A1W2PS18 150 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 TRPC5OSA6NMA1 111 aa3.32□□□□□ -1.88
SNRNP40-205ENST00000486941 ZNF726A6NNF4 738 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms