RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 RAD51DO75771 328 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 RGS9O75916 674 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-204ENST00000483941 LYZL6O75951 148 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 LALBAP00709 142 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 GADD45AP24522 165 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 CHRNB4P30926 498 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 FGF9P31371 208 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-204ENST00000483941 APLNRP35414 380 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 PSMB10P40306 273 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 PABPC1L2AQ5JQF8 200 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 OTPQ5XKR4 325 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 CD200R1LQ6Q8B3 271 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 LUZP2Q86TE4 346 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 CXorf67Q86X51 503 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-204ENST00000483941 CATSPERDQ86XM0 798 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 RPRMLQ8N4K4 120 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 FAM169BQ8N8A8 192 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 KBTBD8Q8NFY9 601 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 RPS4Y2Q8TD47 263 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 GPR148Q8TDV2 347 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 MUCL1Q96DR8 90 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 C4orf45Q96LM5 186 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 TMED9Q9BVK6 235 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 EXOSC4Q9NPD3 245 aaKnown RBP12.19□□□□□ -0.46
SMAD9-204ENST00000483941 NUFIP1Q9UHK0 495 aaKnown RBP12.19□□□□□ -0.46
SMAD9-204ENST00000483941 OR52A1Q9UKL2 312 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 GTF2A1LQ9UNN4 478 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 KLF2Q9Y5W3 355 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-204ENST00000483941 LOC100506127A0A0U1RQW1 187 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 PNMA8CA0A1B0GUJ8 204 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 PRR32B1ATL7 298 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 F5H5K5 113 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 M0R135 149 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 ARL6IP5O75915 188 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 HLA-HP01893 362 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 ISG15P05161 165 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 OTX1P32242 354 aaPredicted RBP12.18□□□□□ -0.46
SMAD9-204ENST00000483941 CX3CR1P49238 355 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 TUBA1BP68363 451 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 GALK2Q01415 458 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 TIMM23BQ5SRD1 257 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF774Q6NX45 483 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 USP43Q70EL4 1123 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 TUBA1AQ71U36 451 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 ELMOD2Q8IZ81 293 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 ZFP41Q8N8Y5 198 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 IL17RDQ8NFM7 739 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 OR10S1Q8NGN2 331 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 ABHD4Q8TB40 342 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF799Q96GE5 643 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 KCTD7Q96MP8 289 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 CHCHD6Q9BRQ6 235 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 WNT5BQ9H1J7 359 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 OR10A2Q9H208 303 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 RGCCQ9H4X1 137 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 SLC17A5Q9NRA2 495 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 FAM206AQ9NX38 181 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 FRRS1LQ9P0K9 344 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 SF3B6Q9Y3B4 125 aaKnown RBP12.18□□□□□ -0.46
SMAD9-204ENST00000483941 GRIP1Q9Y3R0 1128 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 PCNX1Q96RV3 2341 aa12.18□□□□□ -0.46
SMAD9-204ENST00000483941 OR5H1A6NKK0 313 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 OR4C45A6NMZ5 311 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF879B4DU55 563 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 J3QW42 95 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 ZFPL1O95159 310 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 RAF1P04049 648 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 SERPINA5P05154 406 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 CD2P06729 351 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 ANXA2P07355 339 aaKnown RBP12.17□□□□□ -0.46
SMAD9-204ENST00000483941 COX6B1P14854 86 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 CBR1P16152 277 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 PPP3CBP16298 524 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 ACHEP22303 614 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 CRYGSP22914 178 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 CFL1P23528 166 aaKnown RBP12.17□□□□□ -0.46
SMAD9-204ENST00000483941 STOMP27105 288 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 CRYBB2P43320 205 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 SLC6A9P48067 706 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 PRKXP51817 358 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF121P58317 390 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-204ENST00000483941 TBC1D28Q2M2D7 210 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 C3orf36Q3SXR2 165 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 HIKESHIQ53FT3 197 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 WDR38Q5JTN6 314 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF474Q6S9Z5 364 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-204ENST00000483941 AKR7LQ8NHP1 331 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 HSD17B8Q92506 261 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 HTRA1Q92743 480 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 TMEM203Q969S6 136 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 C12orf43Q96C57 262 aaKnown RBP12.17□□□□□ -0.46
SMAD9-204ENST00000483941 PGAM5Q96HS1 289 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 PGLYRP3Q96LB9 341 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 PBOV1Q9GZY1 135 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 B3GNT2Q9NY97 397 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 JKAMPQ9P055 326 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 HHLA2Q9UM44 414 aa12.17□□□□□ -0.46
SMAD9-204ENST00000483941 SIRT4Q9Y6E7 314 aaPredicted RBP12.17□□□□□ -0.46
SMAD9-204ENST00000483941 PHF3Q92576 2039 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms