RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 FBXO17Q96EF6 278 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 ULBP2Q9BZM5 246 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 NELFAQ9H3P2 528 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 HHLA2Q9UM44 414 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 LIPGQ9Y5X9 500 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 ATRXP46100 2492 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 A0A1B0GTI1 187 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 ZNF878C9JN71 531 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 IGHV3-9P01782 118 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 PATE4P0C8F1 98 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 ATF4P18848 351 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 MSR1P21757 451 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 EIF2S3P41091 472 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 MEOX1P50221 254 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 CCL11P51671 97 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 ZNF121P58317 390 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 RTP5Q14D33 572 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 SLC36A2Q495M3 483 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 UBE2NLQ5JXB2 153 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 BCL2L15Q5TBC7 163 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 TRIQKQ629K1 86 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 RNF144BQ7Z419 303 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR51D1Q8NGF3 324 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR13C3Q8NGS6 347 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 OR51E1Q8TCB6 317 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 ADAT3Q96EY9 351 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 SLITRK2Q9H156 845 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 MSRB2Q9Y3D2 182 aa7.78□□□□□ -1.16
CDC42SE1-204ENST00000483763 A0A0B4J293 547 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 CYTIPO60759 359 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 UBL3O95164 117 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 DBHP09172 617 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 ZNF708P17019 499 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 DCTDP32321 178 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 DDOSTP39656 456 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 SOX8P57073 446 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 PSMA6P60900 246 aaKnown RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 LSM6P62312 80 aaKnown RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 SPOCK1Q08629 439 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 DMRTC1Q5HYR2 192 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 FAM166AQ6J272 317 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 PYHIN1Q6K0P9 492 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 FOXL2NBQ6ZUU3 175 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 RHOUQ7L0Q8 258 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 ZFP62Q8NB50 900 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 C19orf18Q8NEA5 215 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 OR8B12Q8NGG6 310 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 FNDC9Q8TBE3 224 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 SYNPRQ8TBG9 265 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 HAS2Q92819 552 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 YIPF5Q969M3 257 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 CPNE4Q96A23 557 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 FGGYQ96C11 551 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 AUNIPQ9H7T9 357 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 ZNF275Q9NSD4 429 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 B4GALT7Q9UBV7 327 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 CGGBP1Q9UFW8 167 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 DOCK7Q96N67 2140 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 LYRM1O43325 122 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 ACHEP22303 614 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 HSD11B1P28845 292 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 PTH2RP49190 550 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 PPIAP62937 165 aaKnown RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 ARG2P78540 354 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 PMP22Q01453 160 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 PLGLB1Q02325 96 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 C21orf62-AS1Q17RA5 79 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 KLHL24Q6TFL4 600 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 ZNF704Q6ZNC4 412 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 AAED1Q7RTV5 226 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 LYPD6Q86Y78 171 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 SLC22A4Q9H015 551 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 HDHD2Q9H0R4 259 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 DEFB127Q9H1M4 99 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 ABCG5Q9H222 651 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 NPDC1Q9NQX5 325 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 STEAP1Q9UHE8 339 aa7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 NUFIP1Q9UHK0 495 aaKnown RBP7.77□□□□□ -1.17
CDC42SE1-204ENST00000483763 F5H5K5 113 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 KLRC4-KLRK1H3BQV0 150 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 ZNHIT1O43257 154 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 EFSO43281 561 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 SYT7O43581 403 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 CD2P06729 351 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 UBCP0CG48 685 aaKnown RBP7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 CALCBP10092 127 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 B4GALT1P15291 398 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 ABOP16442 354 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 CDK2P24941 298 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 CX3CR1P49238 355 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 POU3F4P49335 361 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 TNFSF10P50591 281 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 MMP15P51511 669 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 RRADP55042 308 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 CLN3Q13286 438 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 GPR176Q14439 515 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 TAF13Q15543 124 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 HYAL4Q2M3T9 481 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 C2orf76Q3KRA6 126 aa7.76□□□□□ -1.17
CDC42SE1-204ENST00000483763 GLYATL3Q5SZD4 288 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms