RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 AENQ8WTP8 325 aaKnown RBP12.22□□□□□ -0.45
HDAC6-224ENST00000481929 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.22□□□□□ -0.45
HDAC6-224ENST00000481929 NPFFR1Q9GZQ6 430 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 FAM234AQ9H0X4 552 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 DNAJB11Q9UBS4 358 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 MED31Q9Y3C7 131 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 TRBV5-3A0A0A0MS03 114 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 PRSS12P56730 875 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 TAS2R41P59536 307 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 STX1BP61266 288 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 OR8G1Q15617 311 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 CYP51A1Q16850 503 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 CCDC92Q53HC0 331 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-224ENST00000481929 PAGE3Q5JUK9 113 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 LY6G5BQ8NDX9 201 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 WFDC9Q8NEX5 89 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 SLC26A7Q8TE54 656 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 DMRTB1Q96MA1 342 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 OR52B2Q96RD2 323 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 SSX3Q99909 188 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 PAIP2Q9BPZ3 127 aaKnown RBP12.21□□□□□ -0.45
HDAC6-224ENST00000481929 SSU72Q9NP77 194 aaKnown RBP12.21□□□□□ -0.45
HDAC6-224ENST00000481929 THAP1Q9NVV9 213 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 KAAG1Q9UBP8 84 aa12.21□□□□□ -0.45
HDAC6-224ENST00000481929 NOP16Q9Y3C1 178 aaKnown RBP12.21□□□□□ -0.45
HDAC6-224ENST00000481929 ADARB2-AS1A8MUL3 147 aa12.2□□□□□ -0.46
HDAC6-224ENST00000481929 E9PQ18 207 aa12.2□□□□□ -0.46
HDAC6-224ENST00000481929 SHOX2O60902 331 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-224ENST00000481929 PATL1Q86TB9 770 aaKnown RBP12.2□□□□□ -0.46
HDAC6-224ENST00000481929 FAM90A1Q86YD7 464 aa12.2□□□□□ -0.46
HDAC6-224ENST00000481929 PNKDQ8N490 385 aa12.2□□□□□ -0.46
HDAC6-224ENST00000481929 OR51G2Q8NGK0 314 aa12.2□□□□□ -0.46
HDAC6-224ENST00000481929 SLC7A13Q8TCU3 470 aa12.2□□□□□ -0.46
HDAC6-224ENST00000481929 SPDL1Q96EA4 605 aa12.2□□□□□ -0.46
HDAC6-224ENST00000481929 CITED2Q99967 270 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-224ENST00000481929 RER1O15258 196 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 POLR3GO15318 223 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-224ENST00000481929 MSX2P35548 267 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-224ENST00000481929 UBE2E1P51965 193 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 DLX1P56177 255 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
HDAC6-224ENST00000481929 ACSM1Q08AH1 577 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 OTPQ5XKR4 325 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 FGFRL1Q8N441 504 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 PLPP7Q8NBV4 271 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 PAPD5Q8NDF8 572 aaKnown RBP12.19□□□□□ -0.46
HDAC6-224ENST00000481929 SPRYD4Q8WW59 207 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-224ENST00000481929 COQ7Q99807 217 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 SLC22A4Q9H015 551 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 HDHD2Q9H0R4 259 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 C1orf123Q9NWV4 160 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 RIMS3Q9UJD0 308 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 AURKCQ9UQB9 309 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 POLR1DQ9Y2S0 133 aa12.19□□□□□ -0.46
HDAC6-224ENST00000481929 TEX13CA0A0J9YWL9 993 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 C3orf84H3BNL1 204 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 SNNO75324 88 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-224ENST00000481929 OR5F1O95221 314 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 PTBP3O95758 552 aaKnown RBP12.18□□□□□ -0.46
HDAC6-224ENST00000481929 CA6P23280 308 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 SLC35A2P78381 396 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 POU4F2Q12837 409 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 GK2Q14410 553 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-224ENST00000481929 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 NCR3LG1Q68D85 454 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 BLOC1S3Q6QNY0 202 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 MAVSQ7Z434 540 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 GCSAMQ8N6F7 178 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 Q8N7P7 452 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 LRRC75AQ8NAA5 344 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 RASSF5Q8WWW0 418 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 TNFRSF14Q92956 283 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 TAMM41Q96BW9 452 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 NKX3-1Q99801 234 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-224ENST00000481929 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
HDAC6-224ENST00000481929 POLR2J2Q9GZM3 115 aaKnown RBP12.18□□□□□ -0.46
HDAC6-224ENST00000481929 POLR2J3Q9H1A7 115 aaKnown RBP12.18□□□□□ -0.46
HDAC6-224ENST00000481929 KCNK9Q9NPC2 374 aa12.18□□□□□ -0.46
HDAC6-224ENST00000481929 EPPK1P58107 5090 aaKnown RBP12.17□□□□□ -0.46
HDAC6-224ENST00000481929 IGHV3OR15-7A0A075B7D8 119 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 hCG_1807616A0A1W2PRN6 198 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 A6NLC8 198 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 XKRYO14609 159 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 RGS16O15492 202 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-224ENST00000481929 IFI30P13284 250 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 CTLA4P16410 223 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 FAHP16930 419 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 MRPL19P49406 292 aaKnown RBP12.17□□□□□ -0.46
HDAC6-224ENST00000481929 KRTAP10-11P60412 298 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 MALLQ13021 153 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 MPP2Q14168 576 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 KRT71Q3SY84 523 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 TEX36Q5VZQ5 186 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 COLCA1Q6ZS62 124 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 PGAP1Q75T13 922 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 FUNDC1Q8IVP5 155 aa12.17□□□□□ -0.46
HDAC6-224ENST00000481929 MICU2Q8IYU8 434 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms