RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 HDHD2Q9H0R4 259 aa7.82□□□□□ -1.16
SMARCE1-210ENST00000481231 NMNAT1Q9HAN9 279 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-210ENST00000481231 SAR1AQ9NR31 198 aa7.82□□□□□ -1.16
SMARCE1-210ENST00000481231 GID8Q9NWU2 228 aa7.82□□□□□ -1.16
SMARCE1-210ENST00000481231 CMTM6Q9NX76 183 aa7.82□□□□□ -1.16
SMARCE1-210ENST00000481231 TMEM5Q9Y2B1 443 aa7.82□□□□□ -1.16
SMARCE1-210ENST00000481231 LHFPL6Q9Y693 200 aa7.82□□□□□ -1.16
SMARCE1-210ENST00000481231 NOTCH3Q9UM47 2321 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 TENM2Q9NT68 2774 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 DCTN6O00399 190 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 SOCS2O14508 198 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 ENSAO43768 121 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 FAM20BO75063 409 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 PTP4A3O75365 173 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 NDUFB2O95178 105 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 SFTPBP07988 381 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 MELTFP08582 738 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 FPR3P25089 353 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 SDHAP31040 664 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 PSMB10P40306 273 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 HIST1H3AP68431 136 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 HOXA4Q00056 320 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 COL10A1Q03692 680 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 SF3A3Q12874 501 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 MAB21L1Q13394 359 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 MAPRE2Q15555 327 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 RSPO1Q2MKA7 263 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 KRTAP27-1Q3LI81 207 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 IFI44LQ53G44 452 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 CLEC12AQ5QGZ9 265 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 HIST2H3PS2Q5TEC6 136 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 CORO6Q6QEF8 472 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 Q6YL49 198 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 ZNF620Q6ZNG0 422 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 DCDC5Q6ZRR9 648 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 COLCA1Q6ZS62 124 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 HIST2H3AQ71DI3 136 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 TSEN54Q7Z6J9 526 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 ADCK1Q86TW2 530 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 PIP4P2Q8N4L2 257 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 TMEM86BQ8N661 226 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 GJC3Q8NFK1 279 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 Q8TCH9 128 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 SLC7A13Q8TCU3 470 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 RSRC1Q96IZ7 334 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 HSH2DQ96JZ2 352 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 TSSK2Q96PF2 358 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 GPX7Q96SL4 187 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 HCAR1Q9BXC0 346 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 NOX4Q9NPH5 578 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 NRIP3Q9NQ35 241 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 TMEM100Q9NV29 134 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 MRGBPQ9NV56 204 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 TMCC3Q9ULS5 477 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 SIGLEC7Q9Y286 467 aa7.81□□□□□ -1.16
SMARCE1-210ENST00000481231 IGLV1-36A0A0B4J1U3 117 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 CXCR6O00574 342 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 GPR137BO60478 399 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 TXNDC12O95881 172 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 IRF2P14316 349 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 CFHR2P36980 270 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 CDKN2AP42771 156 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 CENPAP49450 140 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 RAD23AP54725 363 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 FXYD6P3P58550 94 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 BPIFB3P59826 476 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 LIPEQ05469 1076 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 COX10Q12887 443 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 GK2Q14410 553 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 MPPED2Q15777 294 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 PRAMEF6Q5VXH4 476 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 CFAP77Q6ZQR2 320 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 RRM2BQ7LG56 351 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 SLC15A3Q8IY34 581 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 OR11L1Q8NGX0 322 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 PHF21AQ96BD5 680 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 RCN3Q96D15 328 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 ITPKCQ96DU7 683 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 TBX15Q96SF7 602 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 PCGF1Q9BSM1 259 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 MMADHCQ9H3L0 296 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 TOR3AQ9H497 397 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 ANKRD19PQ9H560 264 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 UFSP2Q9NUQ7 469 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 GAR1Q9NY12 217 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 RPS6KA6Q9UK32 745 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 IER3IP1Q9Y5U9 82 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 CAPN7Q9Y6W3 813 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 ENPP4Q9Y6X5 453 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 DOCK11Q5JSL3 2073 aa7.8□□□□□ -1.16
SMARCE1-210ENST00000481231 PLXNB1O43157 2135 aa7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 CENPVL3A0A0U1RRI6 287 aa7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 A0A1W2PRQ8 180 aa7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 ZNF879B4DU55 563 aa7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 F5H5K5 113 aa7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 K7EIL1 84 aa7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 P2RY10O00398 339 aa7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 TNFRSF13BO14836 293 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 PPP1R3DO95685 299 aa7.79□□□□□ -1.16
SMARCE1-210ENST00000481231 SERPINA1P01009 418 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms