RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CADM1Q9BY67 442 aaKnown RBP14.38□□□□□ -0.11
HSPG2-209ENST00000480900 ZNF556Q9HAH1 456 aa14.38□□□□□ -0.11
HSPG2-209ENST00000480900 HIF1ANQ9NWT6 349 aa14.38□□□□□ -0.11
HSPG2-209ENST00000480900 CUBNO60494 3623 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 TRAV20A0A0B4J274 112 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 SPARCP09486 303 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 CLUP10909 449 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 ANXA8P13928 327 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 RASSF2P50749 326 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 MALLQ13021 153 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 GK2Q14410 553 aaPredicted RBP14.37□□□□□ -0.11
HSPG2-209ENST00000480900 LINC01590Q5TEZ4 76 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 DRAM2Q6UX65 266 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 HS3ST5Q8IZT8 346 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 OR2V2Q96R30 315 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 GAL3ST1Q99999 423 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 SLC30A2Q9BRI3 323 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 LPAR2Q9HBW0 351 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 TMEM106BQ9NUM4 274 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 PPP1R3CQ9UQK1 317 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 NPTNQ9Y639 398 aa14.37□□□□□ -0.11
HSPG2-209ENST00000480900 A0A1B0GWJ7 208 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 ISPDA4D126 451 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 IFNL4K9M1U5 179 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 ZNF593O00488 134 aaPredicted RBP14.36□□□□□ -0.11
HSPG2-209ENST00000480900 IGHV2-70P01814 119 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 OSMP13725 252 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 PAICSP22234 425 aaKnown RBP14.36□□□□□ -0.11
HSPG2-209ENST00000480900 SLC6A9P48067 706 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 GINS1Q14691 196 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 CXXC5Q7LFL8 322 aaKnown RBP14.36□□□□□ -0.11
HSPG2-209ENST00000480900 NAA40Q86UY6 237 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 ATG16L2Q8NAA4 619 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 OR10AD1Q8NGE0 317 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 ST7LQ8TDW4 575 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 SLCO4A1Q96BD0 722 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 SLAMF6Q96DU3 332 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 NRBF2Q96F24 287 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 COPS4Q9BT78 406 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 MARCH7Q9H992 704 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 DCAF16Q9NXF7 216 aa14.36□□□□□ -0.11
HSPG2-209ENST00000480900 FAM183AA6NL82 134 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 ZNF878C9JN71 531 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 ATP5HO75947 161 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 HMGN1P05114 100 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 POU1F1P28069 291 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 SRP9P49458 86 aaKnown RBP14.35□□□□□ -0.11
HSPG2-209ENST00000480900 TAF13Q15543 124 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 SHQ1Q6PI26 577 aaKnown RBP14.35□□□□□ -0.11
HSPG2-209ENST00000480900 PGAP1Q75T13 922 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 MRPL21Q7Z2W9 205 aaKnown RBP14.35□□□□□ -0.11
HSPG2-209ENST00000480900 BHLHE23Q8NDY6 225 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 DNAJC9Q8WXX5 260 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 MEGF10Q96KG7 1140 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 INTS14Q96SY0 518 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 KCNJ15Q99712 375 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 MED20Q9H944 212 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 GCM1Q9NP62 436 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 TMEM100Q9NV29 134 aa14.35□□□□□ -0.11
HSPG2-209ENST00000480900 PHF1O43189 567 aaPredicted RBP14.34□□□□□ -0.11
HSPG2-209ENST00000480900 MLNRO43193 412 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 PLPP2O43688 288 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 GLCEO94923 617 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 PRKACGP22612 351 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 GSTT1P30711 240 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 SRP14P37108 136 aaKnown RBP14.34□□□□□ -0.11
HSPG2-209ENST00000480900 SLC15A1P46059 708 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 MMP16P51512 607 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 GRB2P62993 217 aaKnown RBP14.34□□□□□ -0.11
HSPG2-209ENST00000480900 CDK5Q00535 292 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 SNAI3Q3KNW1 292 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 ERI1Q8IV48 349 aaKnown RBP14.34□□□□□ -0.11
HSPG2-209ENST00000480900 SPICQ8N5J4 248 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 SIGLEC11Q96RL6 698 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 MMADHCQ9H3L0 296 aaPredicted RBP14.34□□□□□ -0.11
HSPG2-209ENST00000480900 NTN4Q9HB63 628 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 G6PC2Q9NQR9 355 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 CENPMQ9NSP4 180 aa14.34□□□□□ -0.11
HSPG2-209ENST00000480900 RNF212BA8MTL3 300 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 PRR23D1E9PI22 279 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-209ENST00000480900 H0YL77 283 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 TMEM178BH3BS89 294 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 TIPRLO75663 272 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 PNPP00491 289 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 SBK2P0C263 348 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 PRR23D2P0DMB1 279 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-209ENST00000480900 PRKXP51817 358 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 PRSS12P56730 875 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 BTG1P62324 171 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 HNRNPA0Q13151 305 aaKnown RBP14.33□□□□□ -0.12
HSPG2-209ENST00000480900 EIF2B1Q14232 305 aaKnown RBP14.33□□□□□ -0.12
HSPG2-209ENST00000480900 TMEM155Q4W5P6 130 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 SHFQ7M4L6 423 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 DPY19L4Q7Z388 723 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 LRRC28Q86X40 367 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-209ENST00000480900 OR6N2Q8NGY6 317 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 SPRYD4Q8WW59 207 aaPredicted RBP14.33□□□□□ -0.12
HSPG2-209ENST00000480900 TMEM158Q8WZ71 300 aa14.33□□□□□ -0.12
HSPG2-209ENST00000480900 UTP4Q969X6 686 aaKnown RBP14.33□□□□□ -0.12
HSPG2-209ENST00000480900 OTULINQ96BN8 352 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms