RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MCFD2Q8NI22 146 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 ITLN2Q8WWU7 325 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 WDFY2Q96P53 400 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 TNFRSF13CQ96RJ3 184 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 FEVQ99581 238 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 RBM4BQ9BQ04 359 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 RBM4Q9BWF3 364 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 RBM24Q9BX46 236 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 POLDIP3Q9BY77 421 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 PRRG3Q9BZD7 231 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 UCK2Q9BZX2 261 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 NAA50Q9GZZ1 169 aaKnown RBP5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SHARPINQ9H0F6 387 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SEMA6AQ9H2E6 1030 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SLCO5A1Q9H2Y9 848 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 PLSCR4Q9NRQ2 329 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 KRT84Q9NSB2 600 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 ELOVL5Q9NYP7 299 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 TAS2R5Q9NYW4 299 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 GRHPRQ9UBQ7 328 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SEC14L4Q9UDX3 406 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SLC23A1Q9UHI7 598 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 BAIAP2Q9UQB8 552 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 POFUT2Q9Y2G5 429 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 GMPPBQ9Y5P6 360 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 SESN1Q9Y6P5 492 aa5.44□□□□□ -1.54
SF3B1-209ENST00000479532 ZFYVE26Q68DK2 2539 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 NCOA6Q14686 2063 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 A0A1W2PRX2 142 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MPTX1A8MV57 137 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF814B7Z6K7 855 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF587BE7ETH6 402 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 CDC42EP2O14613 210 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 IMPA2O14732 288 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 SSX5O60225 188 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 RAMP1O60894 148 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 IFNA7P01567 189 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 IFNGP01579 166 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 IGHMP01871 453 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 S100A8P05109 93 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 CD14P08571 375 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 TSPAN19P0C672 248 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 KLK2P20151 261 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 EEF1B2P24534 225 aaKnown RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 PTBP1P26599 531 aaKnown RBP eCLIP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 GUCA1AP43080 201 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 OR3A2P47893 321 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 CSNK1A1P48729 337 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 NKX2-5P52952 324 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 BIDP55957 195 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 RPL27P61353 136 aaKnown RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 TGFBR3Q03167 851 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MELKQ14680 651 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 GUSBP1Q15486 140 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 SPANXN2Q5MJ10 180 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 FBXW9Q5XUX1 488 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 GPR139Q6DWJ6 353 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MYO7BQ6PIF6 2116 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF620Q6ZNG0 422 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 Q6ZT83 130 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 RASSF6Q6ZTQ3 369 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 KRT74Q7RTS7 529 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 NUFIP2Q7Z417 695 aaKnown RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 CCDC190Q86UF4 302 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MEX3DQ86XN8 651 aaKnown RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 CCDC36Q8IYA8 594 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 RDH10Q8IZV5 341 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 SETD9Q8NE22 299 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 BPIFB6Q8NFQ5 453 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 OR6N1Q8NGY5 312 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 OR6X1Q8NH79 312 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MOSPD2Q8NHP6 518 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 IPCEF1Q8WWN9 437 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 HTRA1Q92743 480 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 RORBQ92753 470 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 RNASE6Q93091 150 aaKnown RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MARC2Q969Z3 335 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 STARD4Q96DR4 205 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 NEIL1Q96FI4 390 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 SLC25A44Q96H78 314 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 LRR1Q96L50 414 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 ZNF385AQ96PM9 386 aaKnown RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 DCLRE1CQ96SD1 692 aaKnown RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 TCEAL7Q9BRU2 100 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MRI1Q9BV20 369 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 KATNB1Q9BVA0 655 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 IFT27Q9BW83 186 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 HDHD5Q9BXW7 423 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 LINC00470Q9BZP3 86 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 SLC22A4Q9H015 551 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 NUAK2Q9H093 628 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 GABARAPL1Q9H0R8 117 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 OPN3Q9H1Y3 402 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-209ENST00000479532 OR52D1Q9H346 318 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 TXNIPQ9H3M7 391 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MCCC2Q9HCC0 563 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 ASB6Q9NWX5 421 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 MED29Q9NX70 200 aa5.43□□□□□ -1.54
SF3B1-209ENST00000479532 VNN3Q9NY84 501 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms