RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 CIARTQ8N365 385 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-217ENST00000479161 TCEANCQ8N8B7 351 aa13.19□□□□□ -0.3
C9orf3-217ENST00000479161 OR6N2Q8NGY6 317 aa13.19□□□□□ -0.3
C9orf3-217ENST00000479161 OTULINQ96BN8 352 aa13.19□□□□□ -0.3
C9orf3-217ENST00000479161 CMBLQ96DG6 245 aa13.19□□□□□ -0.3
C9orf3-217ENST00000479161 ZMYND19Q96E35 227 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-217ENST00000479161 PIMREGQ9BSJ6 248 aa13.19□□□□□ -0.3
C9orf3-217ENST00000479161 CHODLQ9H9P2 273 aa13.19□□□□□ -0.3
C9orf3-217ENST00000479161 H2AFY2Q9P0M6 372 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-217ENST00000479161 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.33e-7■■□□□ 11.6
C9orf3-217ENST00000479161 HIVEP2P31629 2446 aa13.19□□□□□ -0.3
C9orf3-217ENST00000479161 CCDC182A6NF36 153 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 EI24O14681 340 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 LYNP07948 512 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 POLR2IP36954 125 aaKnown RBP13.18□□□□□ -0.3
C9orf3-217ENST00000479161 CRYBB2P43320 205 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 NR4A2P43354 598 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 CDC42P60953 191 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 ROM1Q03395 351 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 EIF2B1Q14232 305 aaKnown RBP13.18□□□□□ -0.3
C9orf3-217ENST00000479161 CBR4Q8N4T8 237 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 BBS1Q8NFJ9 593 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 OR52H1Q8NGJ2 320 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 ASB17Q8WXJ9 295 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 SPSB4Q96A44 273 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 COPS4Q9BT78 406 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 EGLN1Q9GZT9 426 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 WARS2Q9UGM6 360 aaKnown RBP13.18□□□□□ -0.3
C9orf3-217ENST00000479161 TANC2Q9HCD6 1990 aa13.18□□□□□ -0.3
C9orf3-217ENST00000479161 ACOD1A6NK06 481 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 TIMM8AO60220 97 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-217ENST00000479161 ZNF254O75437 659 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 LY6HO94772 140 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 IGHV1-46P01743 117 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 HPXP02790 462 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 LCATP04180 440 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 TACSTD2P09758 323 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 RPS7P62081 194 aaKnown RBP13.17□□□□□ -0.3
C9orf3-217ENST00000479161 SNRPGP62308 76 aaKnown RBP13.17□□□□□ -0.3
C9orf3-217ENST00000479161 POU4F2Q12837 409 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 GK2Q14410 553 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-217ENST00000479161 TAF13Q15543 124 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-217ENST00000479161 ZBTB49Q6ZSB9 765 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 PRSS45Q7RTY3 260 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 OR8G5Q8NG78 346 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 OR13G1Q8NGZ3 307 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 RFKQ969G6 155 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 REPIN1Q9BWE0 567 aaKnown RBP13.17□□□□□ -0.3
C9orf3-217ENST00000479161 SLC22A4Q9H015 551 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 TPK1Q9H3S4 243 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 CENPMQ9NSP4 180 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 IL19Q9UHD0 177 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 ZNF391Q9UJN7 358 aa13.17□□□□□ -0.3
C9orf3-217ENST00000479161 NOP16Q9Y3C1 178 aaKnown RBP13.17□□□□□ -0.3
C9orf3-217ENST00000479161 NIPBLQ6KC79 2804 aaeCLIP13.16□□□□□ -0.3
C9orf3-217ENST00000479161 ZSCAN5BA6NJL1 495 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 PHYHO14832 338 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 XRCC2O43543 280 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 SELENOFO60613 162 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 RP2O75695 350 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 HEXAP06865 529 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 USF1P22415 310 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-217ENST00000479161 TNFSF4P23510 183 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 CFL1P23528 166 aaKnown RBP13.16□□□□□ -0.3
C9orf3-217ENST00000479161 HTR1FP30939 366 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 DDOSTP39656 456 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 MEDAGQ5VYS4 303 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 EME1Q96AY2 570 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 ELMOD3Q96FG2 381 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 ZNF582Q96NG8 517 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-217ENST00000479161 SLC30A2Q9BRI3 323 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 RIBC2Q9H4K1 309 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 RGCCQ9H4X1 137 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 DECR2Q9NUI1 292 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 LAMP5Q9UJQ1 280 aa13.16□□□□□ -0.3
C9orf3-217ENST00000479161 IFNL4K9M1U5 179 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 SLC16A6O15403 523 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 MPZL2O60487 215 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 NCR1O76036 304 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 H2BFMP0C1H6 154 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 TNFRSF1AP19438 455 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 HSD11B1P28845 292 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 MAGEB1P43366 347 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 SLC6A9P48067 706 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 CCL8P80075 99 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 OCLNQ16625 522 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 ALKBH6Q3KRA9 238 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 PGAP1Q75T13 922 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 KLBQ86Z14 1044 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-217ENST00000479161 EGFL6Q8IUX8 553 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 PACRGLQ8N7B6 248 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 CELF2-AS1Q8N7Q2 184 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 HPS1Q92902 700 aa13.15□□□□□ -0.3
C9orf3-217ENST00000479161 IL4I1Q96RQ9 567 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms