RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 UNQ6126/PRO20091Q6UXV3 157 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 Q6ZR03 302 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 MEPCEQ7L2J0 689 aaKnown RBP8.26□□□□□ -1.09
HDAC3-208ENST00000476739 OR5AS1Q8N127 324 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 RFLNBQ8N5W9 214 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 OTOSQ8NHW6 89 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 C10orf105Q8TEF2 133 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 RNF133Q8WVZ7 376 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 NEU4Q8WWR8 484 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-208ENST00000476739 FAM168AQ92567 244 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 STMN2Q93045 179 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 HAVCR1Q96D42 359 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 DGCR14Q96DF8 476 aaKnown RBP8.26□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF799Q96GE5 643 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 KCNJ15Q99712 375 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 COPS4Q9BT78 406 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 C9orf16Q9BUW7 83 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 REG4Q9BYZ8 158 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 TTTY10Q9BZA0 68 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 MS4A5Q9H3V2 200 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 TOR3AQ9H497 397 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 SLCO1C1Q9NYB5 712 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 AASSQ9UDR5 926 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 PURGQ9UJV8 347 aaKnown RBP8.26□□□□□ -1.09
HDAC3-208ENST00000476739 COPS3Q9UNS2 423 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 N6AMT1Q9Y5N5 214 aa8.26□□□□□ -1.09
HDAC3-208ENST00000476739 FLNAP21333 2647 aaKnown RBP8.25□□□□□ -1.09
HDAC3-208ENST00000476739 VWC2LB2RUY7 222 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF878C9JN71 531 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 PSMD9O00233 223 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 DLGAP1O14490 977 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 TIMM8AO60220 97 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-208ENST00000476739 LCATP04180 440 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 HNRNPCP07910 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
HDAC3-208ENST00000476739 LYNP07948 512 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ANPEPP15144 967 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 KITLGP21583 273 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 OPRL1P41146 370 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 SLC6A9P48067 706 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 RGS6P49758 472 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF81P51508 661 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 TPTEP56180 551 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 SELENOVP59797 346 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 GK2Q14410 553 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-208ENST00000476739 RCN1Q15293 331 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 NXNL2Q5VZ03 156 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 LPCAT4Q643R3 524 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 OR2T2Q6IF00 324 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 LRRN1Q6UXK5 716 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 FBXW12Q6X9E4 464 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ZBTB49Q6ZSB9 765 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 Q71RC1 249 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-208ENST00000476739 SHFQ7M4L6 423 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 SLC16A9Q7RTY1 509 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 C1orf174Q8IYL3 243 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF786Q8N393 782 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 OR2AE1Q8NHA4 323 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 UBASH3BQ8TF42 649 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 THEM6Q8WUY1 208 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 YIPF5Q969M3 257 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 SPTSSAQ969W0 71 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 EME1Q96AY2 570 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 HRASLS5Q96KN8 279 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF582Q96NG8 517 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-208ENST00000476739 RHNO1Q9BSD3 238 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 PRRG3Q9BZD7 231 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ADGRL4Q9HBW9 690 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 DNAJC27Q9NZQ0 273 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF319Q9P2F9 582 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 ENOPH1Q9UHY7 261 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 FBXO9Q9UK97 447 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-208ENST00000476739 CACNG2Q9Y698 323 aa8.25□□□□□ -1.09
HDAC3-208ENST00000476739 TEP1Q99973 2627 aaKnown RBP8.25□□□□□ -1.09
HDAC3-208ENST00000476739 YLPM1P49750 1951 aaKnown RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 H0YL77 283 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 H3BSA7 217 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 J3QW42 95 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 MAGEB4O15481 346 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 CDC14BO60729 498 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 APOL3O95236 402 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 LY6G6DO95868 133 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 ERCC1P07992 297 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 RAC2P15153 192 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 FOSL1P15407 271 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 ALOX5APP20292 161 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 TUBG1P23258 451 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 PEX2P28328 305 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 CX3CR1P49238 355 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 PDLIM4P50479 330 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 RAD23AP54725 363 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF121P58317 390 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 DSCR9P59020 149 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 GRB2P62993 217 aaKnown RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 ZNF92Q03936 586 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 KRTAP1-1Q07627 177 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 DCTN2Q13561 401 aaKnown RBP8.24□□□□□ -1.09
HDAC3-208ENST00000476739 GGTLC2Q14390 218 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 TAF13Q15543 124 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 NDUFA5Q16718 116 aa8.24□□□□□ -1.09
HDAC3-208ENST00000476739 LRRC36Q1X8D7 754 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms