RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 TACR3P29371 465 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 MAZP56270 477 aaKnown RBP6.11□□□□□ -1.43
UBR4-212ENST00000475973 UBE2MP61081 183 aaKnown RBP6.11□□□□□ -1.43
UBR4-212ENST00000475973 RPL27P61353 136 aaKnown RBP6.11□□□□□ -1.43
UBR4-212ENST00000475973 PPP1CAP62136 330 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 SKP1P63208 163 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 BTG2P78543 158 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 DHRS2Q13268 280 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 GRM7Q14831 915 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 ETFDHQ16134 617 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 ZNF239Q16600 458 aaKnown RBP6.11□□□□□ -1.43
UBR4-212ENST00000475973 GXYLT1Q4G148 440 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 GLT8D1Q68CQ7 371 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 ZNF787Q6DD87 383 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 C11orf87Q6NUJ2 197 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 INO80CQ6PI98 192 aaPredicted RBP6.11□□□□□ -1.43
UBR4-212ENST00000475973 LRFN4Q6PJG9 635 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 ATRAIDQ6UW56 229 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 TMEM205Q6UW68 189 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 ACOT7LQ6ZUV0 252 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 RHOUQ7L0Q8 258 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 JAZF1Q86VZ6 243 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 OOSP2Q86WS3 158 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 AVL9Q8NBF6 648 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 SLC30A7Q8NEW0 376 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 PXT1Q8NFP0 134 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 DMBX1Q8NFW5 382 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 ST7LQ8TDW4 575 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 PATE1Q8WXA2 126 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 FOXRED1Q96CU9 486 aaPredicted RBP6.11□□□□□ -1.43
UBR4-212ENST00000475973 TCTN2Q96GX1 697 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 DGAT2Q96PD7 388 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 SLC38A3Q99624 504 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 CHIAQ9BZP6 476 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 RTN4RQ9BZR6 473 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 MFFQ9GZY8 342 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 ARL6Q9H0F7 186 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.11□□□□□ -1.43
UBR4-212ENST00000475973 KCNG2Q9UJ96 466 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 LAMP5Q9UJQ1 280 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 PURGQ9UJV8 347 aaKnown RBP6.11□□□□□ -1.43
UBR4-212ENST00000475973 CARHSP1Q9Y2V2 147 aaKnown RBP6.11□□□□□ -1.43
UBR4-212ENST00000475973 SESN1Q9Y6P5 492 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 HEATR5AQ86XA9 2040 aa6.11□□□□□ -1.43
UBR4-212ENST00000475973 A0A0A6YYC8 382 aaPredicted RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 A0A1W2PNU3 283 aaPredicted RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 TCRBV16S1A1N1A0A5B0 115 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 TMEM82A0PJX8 343 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 OR5H14A6NHG9 310 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 FOXI3A8MTJ6 420 aaPredicted RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 TMEM14DPA8MWL7 114 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 SHISA8B8ZZ34 492 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 I3L1I5 382 aaPredicted RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 PSMD9O00233 223 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 CLDN4O14493 209 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 PLPP3O14495 311 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 GOSR2O14653 212 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 DUX1O43812 170 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 UTS2O95399 124 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 RAB3DO95716 219 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 HEXAP06865 529 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 GTF2F2P13984 249 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 RAB3AP20336 220 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 CNR1P21554 472 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 HTR2CP28335 458 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 HSD11B1P28845 292 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 SOX2P48431 317 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 EFNA3P52797 238 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 PNLIPRP2P54317 469 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 GPR85P60893 370 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 CFHR1Q03591 330 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ZNF117Q03924 483 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ZFP36L1Q07352 338 aaKnown RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 TRA2AQ13595 282 aaKnown RBP eCLIP6.1□□□□□ -1.43
UBR4-212ENST00000475973 MEF2DQ14814 521 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 MEP1BQ16820 701 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 PAN3Q58A45 887 aaKnown RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 RAB12Q6IQ22 244 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 SLC18B1Q6NT16 456 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 KCTD18Q6PI47 426 aaPredicted RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 CORO6Q6QEF8 472 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ALKAL2Q6UX46 152 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 DRAM2Q6UX65 266 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 TMPRSS9Q7Z410 1059 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 LYG2Q86SG7 212 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ADGRE4PQ86SQ3 457 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 PEG10Q86TG7 708 aaKnown RBP6.1□□□□□ -1.43
UBR4-212ENST00000475973 LINC00518Q8N0U6 118 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 CARFQ8N187 725 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 GALNT16Q8N428 558 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ZNF676Q8N7Q3 588 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 NKAIN3Q8N8D7 197 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 TMEM185AQ8NFB2 350 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 SLC26A10Q8NG04 563 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 OR52N5Q8NH56 324 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 OR10G6Q8NH81 332 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 ZNF721Q8TF20 911 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 MVB12AQ96EY5 273 aa6.1□□□□□ -1.43
UBR4-212ENST00000475973 C1orf147Q96MC9 270 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms