RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 VASPP50552 380 aaPredicted RBP10.51□□□□□ -0.73
U2AF1-209ENST00000475639 TRA2BP62995 288 aaKnown RBP10.51□□□□□ -0.73
U2AF1-209ENST00000475639 KIR2DS5Q14953 304 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 GUCA2BQ16661 112 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 TMEM176BQ3YBM2 270 aaPredicted RBP10.51□□□□□ -0.73
U2AF1-209ENST00000475639 PRAMEF5Q5TYX0 476 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 PRAMEF6Q5VXH4 476 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 SPICQ8N5J4 248 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 OR5D18Q8NGL1 313 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 TCTN2Q96GX1 697 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 OR2A7Q96R45 310 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 CLCF1Q9UBD9 225 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 CAMK2AQ9UQM7 478 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 PATJQ8NI35 1801 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 TRAV27A0A087WT01 109 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 A0A0J9YY10 115 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 JTBO76095 146 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 GPR75O95800 540 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 RPA2P15927 270 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 CD1CP29017 333 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 CLDN12P56749 244 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 MFSD12Q6NUT3 480 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 IGSF8Q969P0 613 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 SLC25A28Q96A46 364 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 NRIP3Q9NQ35 241 aa10.51□□□□□ -0.73
U2AF1-209ENST00000475639 UNC13CQ8NB66 2214 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 LRRC30A6NM36 301 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 RAD52P43351 418 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 MMP15P51511 669 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 CCR9P51686 369 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 SNRPEP62304 92 aaKnown RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 RPE65Q16518 533 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 DHRS11Q6UWP2 260 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 H2BFWTQ7Z2G1 175 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF761Q86XN6 746 aaPredicted RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 EID2Q8N6I1 236 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 GHSRQ92847 366 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 SEMA4GQ9NTN9 838 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 PISDQ9UG56 409 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF587BE7ETH6 402 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 NPIPB8E9PQR5 432 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 PHOX2AO14813 284 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 STC2O76061 302 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 PTBP3O95758 552 aaKnown RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 OPN1LWP04000 364 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 RGRP47804 291 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 PIP5KL1Q5T9C9 394 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 CBARPQ8N350 705 aaPredicted RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 WNT2BQ93097 391 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 SOX7Q9BT81 388 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 SUCNR1Q9BXA5 334 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 RSPO3Q9BXY4 272 aaPredicted RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 SPTBN1Q01082 2364 aaKnown RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 DNAH12Q6ZR08 3092 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF840PA6NDX5 716 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 NCBP2LA6PVI3 153 aaKnown RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 AKR7A3O95154 331 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 F13BP05160 661 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 CTXN2P0C2S0 81 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 MTNR1BP49286 362 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 ELLP55199 621 aaPredicted RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 FAM27D1Q5T7N8 215 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 SFXN4Q6P4A7 337 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 PHOSPHO2Q8TCD6 241 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 LGALS14Q8TCE9 139 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 APOBEC4Q8WW27 367 aaKnown RBP10.5□□□□□ -0.73
U2AF1-209ENST00000475639 UCK1Q9HA47 277 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 ETV7Q9Y603 341 aa10.5□□□□□ -0.73
U2AF1-209ENST00000475639 A0A1B0GUH1 482 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 MEX3AA1L020 520 aaKnown RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ARPC3O15145 178 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF264O43296 627 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF93P35789 620 aaPredicted RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 PCBP3P57721 371 aaKnown RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 PRSS45Q7RTY3 260 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ELF4Q99607 663 aaPredicted RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 AUNIPQ9H7T9 357 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 DMRT3Q9NQL9 472 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 MTCH1Q9NZJ7 389 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 SERTM2A0A1B0GWG4 89 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ANKUB1A6NFN9 424 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 HSPB6O14558 160 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ATP1B1P05026 303 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ADCYAP1P18509 176 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 ADRA2CP18825 462 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 SHC1P29353 583 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 CD80P33681 288 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 RAB1AP62820 205 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 FZD5Q13467 585 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 OR1Q1Q15612 314 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 CPEB2Q7Z5Q1 589 aaKnown RBP10.49□□□□□ -0.73
U2AF1-209ENST00000475639 NKAIN3Q8N8D7 197 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 OR2AE1Q8NHA4 323 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 VOPP1Q96AW1 172 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 S1PR3Q99500 378 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
U2AF1-209ENST00000475639 TPSD1Q9BZJ3 242 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms