RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ZNF101Q8IZC7 436 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 CBR4Q8N4T8 237 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 IPCEF1Q8WWN9 437 aaPredicted RBP12.88□□□□□ -0.35
VARS-223ENST00000474643 PITX2Q99697 317 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 OR2J1Q9GZK6 312 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 ZNF665Q9H7R5 613 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 CGGBP1Q9UFW8 167 aaPredicted RBP12.88□□□□□ -0.35
VARS-223ENST00000474643 ORC6Q9Y5N6 252 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 A0A0G2JMP0 313 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 A0A0X1KG70 313 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 SAC3D1A6NKF1 404 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 FAM157AC9JC47 383 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 RP2O75695 350 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 PNPP00491 289 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 SPI1P17947 270 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 LIPAP38571 399 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 WNT5AP41221 380 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 SLC25A1P53007 311 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 CRISP1P54107 249 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 ZNF362Q5T0B9 420 aaPredicted RBP12.87□□□□□ -0.35
VARS-223ENST00000474643 TMEM236Q5W0B7 351 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 RFPL4BQ6ZWI9 263 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 OR4M2Q8NGB6 313 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 OR1F12Q8NHA8 337 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 KLF14Q8TD94 323 aaPredicted RBP12.87□□□□□ -0.35
VARS-223ENST00000474643 ST7LQ8TDW4 575 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 ZNF418Q8TF45 676 aaPredicted RBP12.87□□□□□ -0.35
VARS-223ENST00000474643 GTF3AQ92664 365 aaKnown RBP12.87□□□□□ -0.35
VARS-223ENST00000474643 C1orf159Q96HA4 380 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 C4orf45Q96LM5 186 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 PRRG3Q9BZD7 231 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 OR51V1Q9H2C8 321 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 MED20Q9H944 212 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 TVP23BQ9NYZ1 205 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 UBAP1Q9NZ09 502 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 NKX1-2Q9UD57 310 aaPredicted RBP12.87□□□□□ -0.35
VARS-223ENST00000474643 LHFPL6Q9Y693 200 aa12.87□□□□□ -0.35
VARS-223ENST00000474643 OR6C6A6NF89 314 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 H3BSA7 217 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 EI24O14681 340 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 WNT9BO14905 357 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 SPARCP09486 303 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 CLUP10909 449 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 MPV17P39210 176 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 BLVRAP53004 296 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 RPS7P62081 194 aaKnown RBP12.86□□□□□ -0.35
VARS-223ENST00000474643 CDK5Q00535 292 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 SNAPC1Q16533 368 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 KLHL12Q53G59 568 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 CCDC92Q53HC0 331 aaPredicted RBP12.86□□□□□ -0.35
VARS-223ENST00000474643 MBNL2Q5VZF2 373 aaKnown RBP12.86□□□□□ -0.35
VARS-223ENST00000474643 SLC7A6Q92536 515 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 DIRC2Q96SL1 478 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 DDOQ99489 341 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 GABARAPL3Q9BY60 117 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 HDHD2Q9H0R4 259 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 SLC25A19Q9HC21 320 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 KCNG2Q9UJ96 466 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 ZDHHC8Q9ULC8 765 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 WIPI2Q9Y4P8 454 aa12.86□□□□□ -0.35
VARS-223ENST00000474643 SURF4O15260 269 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 MITFO75030 526 aaPredicted RBP12.85□□□□□ -0.35
VARS-223ENST00000474643 RGS9O75916 674 aaPredicted RBP12.85□□□□□ -0.35
VARS-223ENST00000474643 IGHV1-46P01743 117 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 RPS27P42677 84 aaKnown RBP12.85□□□□□ -0.35
VARS-223ENST00000474643 ACTG1P63261 375 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 TNFAIP6P98066 277 aaPredicted RBP12.85□□□□□ -0.35
VARS-223ENST00000474643 TAF13Q15543 124 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 SLC18B1Q6NT16 456 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 PLBD1Q6P4A8 553 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 LYPD4Q6UWN0 246 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 ERI1Q8IV48 349 aaKnown RBP12.85□□□□□ -0.35
VARS-223ENST00000474643 ZNF511Q8NB15 262 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 ZNRF4Q8WWF5 429 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 MARS2Q96GW9 593 aaKnown RBP12.85□□□□□ -0.35
VARS-223ENST00000474643 COQ7Q99807 217 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 MRPL22Q9NWU5 206 aaKnown RBP12.85□□□□□ -0.35
VARS-223ENST00000474643 PCDHB10Q9UN67 800 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 COMMD3-BMI1R4GMX3 469 aa12.85□□□□□ -0.35
VARS-223ENST00000474643 E9PQ18 207 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 DBHP09172 617 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 PEX2P28328 305 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 GSTT1P30711 240 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 ENTPD1P49961 510 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 PTGES3Q15185 160 aaKnown RBP12.84□□□□□ -0.35
VARS-223ENST00000474643 DCAF12L2Q5VW00 463 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 CFAP77Q6ZQR2 320 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 CPOQ8IVL8 374 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 OR6N2Q8NGY6 317 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 COG8Q96MW5 612 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 DCLRE1CQ96SD1 692 aaKnown RBP12.84□□□□□ -0.35
VARS-223ENST00000474643 SLC29A1Q99808 456 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 ATF6BQ99941 703 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 NMNAT2Q9BZQ4 307 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 RIBC2Q9H4K1 309 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 WDR76Q9H967 626 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 MSL2Q9HCI7 577 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 SMPD3Q9NY59 655 aaPredicted RBP12.84□□□□□ -0.35
VARS-223ENST00000474643 CYB5R1Q9UHQ9 305 aa12.84□□□□□ -0.35
VARS-223ENST00000474643 ATPIF1Q9UII2 106 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms