RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 GLYATL3Q5SZD4 288 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 PDSS1Q5T2R2 415 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 TMEM244Q5VVB8 128 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 KRT74Q7RTS7 529 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 SKA3Q8IX90 412 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 TMEM178AQ8NBL3 297 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 GJC3Q8NFK1 279 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 OR52N4Q8NGI2 321 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 OR2AE1Q8NHA4 323 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 NPRL2Q8WTW4 380 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 TRIM63Q969Q1 353 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 PGAM5Q96HS1 289 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 KCNJ15Q99712 375 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 FOXB1Q99853 325 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 NEURL2Q9BR09 285 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 THAP7Q9BT49 309 aaPredicted RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 ZNF275Q9NSD4 429 aaPredicted RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 NUFIP1Q9UHK0 495 aaKnown RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 CDV3Q9UKY7 258 aaKnown RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 MCTS1Q9ULC4 181 aaKnown RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 RCE1Q9Y256 329 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 GTF3C1Q12789 2109 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 ACOT7O00154 380 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 PDGFAP04085 211 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 HNRNPCP07910 306 aaKnown RBP eCLIP5.46□□□□□ -1.54
CLK1-210ENST00000473565 NR2C1P13056 603 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 ZNF24P17028 368 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 IGFBP3P17936 291 aaPredicted RBP5.46□□□□□ -1.54
CLK1-210ENST00000473565 CDK2P24941 298 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 INPP1P49441 399 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 RAB25P57735 213 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 ASAH1Q13510 395 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 RTP5Q14D33 572 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 ELFN2Q5R3F8 820 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 FAM27BQ5VT28 67 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 ZNF813Q6ZN06 617 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 FOXL2NBQ6ZUU3 175 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 EGFL6Q8IUX8 553 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 OR4D6Q8NGJ1 314 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 OR5M9Q8NGP3 310 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 RFT1Q96AA3 541 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 WDYHV1Q96HA8 205 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 LYZL4Q96KX0 146 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 CKLFQ9UBR5 152 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 STEAP1Q9UHE8 339 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 PTPRQQ9UMZ3 2332 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 MEIOCA2RUB1 952 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 MEIS3P1A6NDR6 274 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 ZNF503-AS2A6NEH8 195 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 ZNF891A8MT65 544 aaPredicted RBP5.46□□□□□ -1.54
CLK1-210ENST00000473565 CCL2P13500 99 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 ARF1P84077 181 aaKnown RBP5.46□□□□□ -1.54
CLK1-210ENST00000473565 RAB11BQ15907 218 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 C2orf76Q3KRA6 126 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 IGF2-ASQ6U949 168 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 CHMP1BQ7LBR1 199 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 SLC16A14Q7RTX9 510 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 RTN4RL2Q86UN3 420 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 GCNT2Q8N0V5 402 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 SLC22A24Q8N4F4 322 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 MINDY2Q8NBR6 621 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 YIPF5Q969M3 257 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 FAM46BQ96A09 425 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 FAM3DQ96BQ1 224 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 SLCO5A1Q9H2Y9 848 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 TBCCD1Q9NVR7 557 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 NLKQ9UBE8 527 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 PRSS50Q9UI38 385 aa5.46□□□□□ -1.54
CLK1-210ENST00000473565 TMEM272A0A1B0GTI8 110 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 LINC01387J3KSC0 135 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 M0R135 149 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 LYRM1O43325 122 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 SGCEO43556 437 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 HLA-HP01893 362 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 DDOSTP39656 456 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 RANBP1P43487 201 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 MAP2K3P46734 347 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 PSG4Q00888 419 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 FAPQ12884 760 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 RIN1Q13671 783 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 GPR176Q14439 515 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 TMEM69Q5SWH9 247 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 PYHIN1Q6K0P9 492 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 OR52I2Q8NH67 350 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 CPT1CQ8TCG5 803 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ITFG2Q969R8 447 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 INTS12Q96CB8 462 aaKnown RBP5.45□□□□□ -1.54
CLK1-210ENST00000473565 ZNF799Q96GE5 643 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 TAAR6Q96RI8 345 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ZDHHC11Q9H8X9 412 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ZMAT3Q9HA38 289 aaKnown RBP5.45□□□□□ -1.54
CLK1-210ENST00000473565 ACKR4Q9NPB9 350 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 FOXJ3Q9UPW0 622 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 INTS1Q8N201 2190 aaKnown RBP5.45□□□□□ -1.54
CLK1-210ENST00000473565 SPTA1P02549 2419 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 IGKV3D-15A0A087WSY6 115 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 A0A0B4J293 547 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 A8MV72 311 aaPredicted RBP5.45□□□□□ -1.54
CLK1-210ENST00000473565 PROB1E7EW31 1015 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 SLC17A2O00624 439 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms