RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 H3F3CQ6NXT2 135 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 EMBQ6PCB8 327 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 FRA10AC1Q70Z53 315 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 SNX20Q7Z614 316 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 CMC1Q7Z7K0 106 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 APRG1Q8IVJ8 170 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 TMEM61Q8N0U2 210 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 METTL4Q8N3J2 472 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 LIX1Q8N485 282 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 OR10AD1Q8NGE0 317 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 OR5T2Q8NGG2 359 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 OR10G7Q8NGN6 311 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 OR2A12Q8NGT7 310 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 OR51A7Q8NH64 312 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 ING5Q8WYH8 240 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 GTF3AQ92664 365 aaKnown RBP2.06□□□□□ -2.08
XRN1-210ENST00000472697 C20orf144Q9BQM9 153 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 IL26Q9NPH9 171 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 CTPS2Q9NRF8 586 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 GIN1Q9NXP7 522 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 CHMP5Q9NZZ3 219 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 COPS3Q9UNS2 423 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 MTCH2Q9Y6C9 303 aa2.06□□□□□ -2.08
XRN1-210ENST00000472697 A8MXK9 166 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 ZNF487B1APH4 448 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 ANKRD63C9JTQ0 380 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 SMKR1H3BMG3 65 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 J3QLI3 93 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 ICOSLGO75144 302 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 CRLF1O75462 422 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 YEATS4O95619 227 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 NTN1O95631 604 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 PCCAP05165 728 aaPredicted RBP2.05□□□□□ -2.08
XRN1-210ENST00000472697 PGAM1P18669 254 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 CNR1P21554 472 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 IVDP26440 423 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 KDELR2P33947 212 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 MAGEA3P43357 314 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 PRLHRP49683 370 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 PSMD7P51665 324 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 NCBP2P52298 156 aaKnown RBP eCLIP2.05□□□□□ -2.08
XRN1-210ENST00000472697 ZNF121P58317 390 aaPredicted RBP2.05□□□□□ -2.08
XRN1-210ENST00000472697 RUNX3Q13761 415 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 FZD2Q14332 565 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 TIGD3Q6B0B8 471 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 LRRTM1Q86UE6 522 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 UNC93AQ86WB7 457 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 OR9G1Q8NH87 305 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 PYROXD1Q8WU10 500 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 C17orf50Q8WW18 174 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 TMEM54Q969K7 222 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 FAM131CQ96AQ9 280 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 GMPPAQ96IJ6 420 aaPredicted RBP2.05□□□□□ -2.08
XRN1-210ENST00000472697 MBOAT7Q96N66 472 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 SPACA5Q96QH8 159 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 LITAFQ99732 161 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 SYT15Q9BQS2 421 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 SRXN1Q9BYN0 137 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 UPF3AQ9H1J1 476 aaKnown RBP2.05□□□□□ -2.08
XRN1-210ENST00000472697 NIPAL2Q9H841 368 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 POLD4Q9HCU8 107 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.05□□□□□ -2.08
XRN1-210ENST00000472697 TXLNGQ9NUQ3 528 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 DDIT4Q9NX09 232 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 MAT2BQ9NZL9 334 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 OR1A1Q9P1Q5 309 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 ZNF107Q9UII5 783 aaPredicted RBP2.05□□□□□ -2.08
XRN1-210ENST00000472697 KLF12Q9Y4X4 402 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 GOLGB1Q14789 3259 aaKnown RBP2.05□□□□□ -2.08
XRN1-210ENST00000472697 CACNA1BQ00975 2339 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 IGLV4-3A0A075B6K6 122 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 TSPAN11A1L157 253 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 KRTAP29-1A8MX34 341 aaPredicted RBP2.05□□□□□ -2.08
XRN1-210ENST00000472697 ITGB1BP1O14713 200 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 IDH3BO43837 385 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 ZG16O60844 167 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 FKBP6O75344 327 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 TRAPPC6AO75865 159 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 OAZ2O95190 189 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 NUDT14O95848 222 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 MOSP00540 346 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 TIMP1P01033 207 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 HBE1P02100 147 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 S100A6P06703 90 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 RAB4AP20338 218 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 M6PRP20645 277 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 PRKAR2BP31323 418 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 HILS1P60008 231 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 CXCL6P80162 114 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 C5orf64Q2M2E5 130 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 ZNF876PQ49A33 203 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 PTPN20Q4JDL3 420 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 MARCH8Q5T0T0 291 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 FAHD1Q6P587 224 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 XKRXQ6PP77 449 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 CEACAM19Q7Z692 300 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 ZFAND4Q86XD8 727 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 PLCZ1Q86YW0 608 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 ENTHD1Q8IYW4 607 aa2.05□□□□□ -2.08
XRN1-210ENST00000472697 OR13G1Q8NGZ3 307 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms