RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 HTR2AP28223 471 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SRP9P49458 86 aaKnown RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 MMP15P51511 669 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ZNF133P52736 654 aaPredicted RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 CDH12P55289 794 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 TAS2R41P59536 307 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 RAP1BP61224 184 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 RAP1AP62834 184 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 GNB2P62879 340 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 LCN2P80188 198 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 TNFAIP6P98066 277 aaPredicted RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 DEFA6Q01524 100 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 CD47Q08722 323 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MZT1Q08AG7 82 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MELKQ14680 651 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 HIST3H3Q16695 136 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 TSTQ16762 297 aaKnown RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 C2orf68Q2NKX9 166 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MS4A18Q3C1V0 323 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 PABPC1L2AQ5JQF8 200 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 THEM4Q5T1C6 240 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 AVPI1Q5T686 147 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 GPR157Q5UAW9 335 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SUMO4Q6EEV6 95 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 C11orf87Q6NUJ2 197 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 LEG1Q6P5S2 330 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 C11orf88Q6PI97 169 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 PTCHD4Q6ZW05 846 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 LRP11Q86VZ4 500 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SKA3Q8IX90 412 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 PARP8Q8N3A8 854 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ZNF283Q8N7M2 679 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SIGLECL1Q8N7X8 197 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ZDHHC22Q8N966 263 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 DEFB108BQ8NET1 73 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 OR8B3Q8NGG8 313 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 OR52E2Q8NGJ4 325 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 NFKBIDQ8NI38 313 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 KLF14Q8TD94 323 aaPredicted RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 ADAMTS16Q8TE57 1224 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 AENQ8WTP8 325 aaKnown RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 SSMEM1Q8WWF3 244 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 GTF2H4Q92759 462 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MAL2Q969L2 176 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MCHR2Q969V1 340 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ERGIC1Q969X5 290 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 VPS33AQ96AX1 596 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 RASD2Q96D21 266 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SPDL1Q96EA4 605 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 FAM71F1Q96KD3 344 aaPredicted RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 TEX37Q96LM6 180 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SAMD8Q96LT4 415 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ZNF75AQ96N20 296 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 OR8B2Q96RD0 313 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SEPHS2Q99611 448 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MCHR1Q99705 422 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SIKE1Q9BRV8 207 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 EMC6Q9BV81 110 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SLC22A4Q9H015 551 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 PCDHAC1Q9H158 963 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 PATZ1Q9HBE1 687 aaKnown RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 KRCC1Q9NPI7 259 aaPredicted RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 INIPQ9NRY2 104 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 TMEM106BQ9NUM4 274 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ZNF224Q9NZL3 707 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MYEF2Q9P2K5 600 aaKnown RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 SEC14L4Q9UDX3 406 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MIOXQ9UGB7 285 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 FZR1Q9UM11 496 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 PPIAL4AQ9Y536 164 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 TIMM10BQ9Y5J6 103 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 TENM1Q9UKZ4 2725 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ARFGEF3Q5TH69 2177 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 MALRD1Q5VYJ5 2156 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 IGHV2-70DA0A0C4DH43 119 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 TMEM120BA0PK00 339 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 CPSF4LA6NMK7 179 aaKnown RBP2.93□□□□□ -1.94
XRN1-209ENST00000472625 SRRM5B3KS81 715 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 C11orf98E9PRG8 122 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 BLOC1S5-TXNDC5H3BN57 136 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 M0R3H8 397 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 KPNA4O00629 521 aaPredicted RBP2.93□□□□□ -1.94
XRN1-209ENST00000472625 SPRY3O43610 288 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 NDUFA2O43678 99 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 DOK2O60496 412 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 NDUFA7O95182 113 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 OR5F1O95221 314 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 CH25HO95992 272 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 CLPTM1O96005 669 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 HPRP00739 348 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 MT-ND1P03886 318 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 IGFBP1P08833 259 aaPredicted RBP2.93□□□□□ -1.94
XRN1-209ENST00000472625 MMP7P09237 267 aaPredicted RBP2.93□□□□□ -1.94
XRN1-209ENST00000472625 HLA-DOBP13765 273 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 ACADSP16219 412 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 ZNF32P17041 273 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 GPX2P18283 190 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 KITLGP21583 273 aa2.93□□□□□ -1.94
XRN1-209ENST00000472625 PAICSP22234 425 aaKnown RBP2.93□□□□□ -1.94
XRN1-209ENST00000472625 CBLP22681 906 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms