RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 APOBEC3HQ6NTF7 200 aaKnown RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 ZFP1Q6P2D0 407 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 FAM199XQ6PEV8 388 aaPredicted RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 TMPRSS11AQ6ZMR5 421 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ZFP2Q6ZN57 461 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 SETD3Q86TU7 594 aaPredicted RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 NT5DC3Q86UY8 548 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 TMEM17Q86X19 198 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 DHFR2Q86XF0 187 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 MMAAQ8IVH4 418 aaKnown RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 BOD1L2Q8IYS8 172 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 SAXO1Q8IYX7 474 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 RIBC1Q8N443 379 aaPredicted RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 C8orf31Q8N9H6 132 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 STXBP6Q8NFX7 210 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 OR1L4Q8NGR5 311 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 OR6X1Q8NH79 312 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 WDR36Q8NI36 951 aaKnown RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 NANPQ8TBE9 248 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 DYNC2LI1Q8TCX1 351 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 PIH1D2Q8WWB5 315 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 TMBIM1Q969X1 311 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 FAM131CQ96AQ9 280 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 C8orf44Q96CB5 159 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 TMEM80Q96HE8 168 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 FAM210BQ96KR6 192 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 PRAP1Q96NZ9 151 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 SERPINB11Q96P15 392 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 QKIQ96PU8 341 aaKnown RBP eCLIP2.5□□□□□ -2.019e-30■■■■■ 40
CD46-213ENST00000471987 KLHDC3Q9BQ90 382 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 KIFC1Q9BW19 673 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ERVK-6Q9BXR3 956 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ULBP2Q9BZM5 246 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 UCK2Q9BZX2 261 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 YIPF3Q9GZM5 350 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 PCBD2Q9H0N5 130 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 PLGRKTQ9HBL7 147 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 OR1A1Q9P1Q5 309 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 MIOXQ9UGB7 285 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 BTNL2Q9UIR0 455 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 POLR3HQ9Y535 204 aaPredicted RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 SLIT3O75094 1523 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ZFYVE9O95405 1425 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 CAMSAP1Q5T5Y3 1602 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 VIRMAQ69YN4 1812 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 IGLV4-69A0A075B6H9 119 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 KBTBD11-OT1A0A1B0GTJ5 212 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 A0A1B0GVG6 124 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 A0A1W2PNV4 684 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 A6NDX4 124 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 METTL15A6NJ78 407 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 C9J4A7 227 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 H3BNH8 94 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CLDN34H7C241 214 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CLDN5O00501 218 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 SLC16A4O15374 487 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 ZSCAN12O43309 604 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CHP2O43745 196 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 MGRN1O60291 552 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 EIF1BO60739 113 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 SRP72O76094 671 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 PSMG1O95456 288 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CTDNEP1O95476 244 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CD5P06127 495 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CD55P08174 381 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 NBEAP1P0C6P0 100 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 OR8U8P0C7N1 319 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 PET100P0DJ07 73 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 RNH1P13489 461 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 ADRB3P13945 408 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 ETS2P15036 469 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 UCHL3P15374 230 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CD82P27701 267 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 GTF2E2P29084 291 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 NTSP30990 170 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 PHBP35232 272 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CYLC1P35663 651 aaPredicted RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 CFHR2P36980 270 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 EIF1P41567 113 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 BTDP43251 543 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CRYBB2P43320 205 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 MAGEA12P43365 314 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 SLCO1A2P46721 670 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 RFX3P48380 749 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 HCAR3P49019 387 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 CCL11P51671 97 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 HSPA2P54652 639 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 LSM6P62312 80 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 RBX1P62877 108 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 PSPHP78330 225 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 LCN2P80188 198 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 MRPS22P82650 360 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 BNIP2Q12982 314 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 MESDQ14696 234 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 GANABQ14697 944 aaKnown RBP2.49□□□□□ -2.01
CD46-213ENST00000471987 ARL6IP1Q15041 203 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 SYPL1Q16563 259 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 SYPL2Q5VXT5 272 aa2.49□□□□□ -2.01
CD46-213ENST00000471987 STUMQ69YW2 141 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms