RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 C3orf49Q96BT1 292 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-205ENST00000469550 EGLN1Q9GZT9 426 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 UQCC1Q9NVA1 299 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 PILRAQ9UKJ1 303 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 OR10H1Q9Y4A9 318 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 IGHV5-10-1A0A0J9YXX1 117 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 C9orf170A2RU37 121 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 MEGF11A6BM72 1044 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 B4E171 279 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 STMND1H3BQB6 276 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 GNB5O14775 395 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 LDLRAD4O15165 306 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 FADS1O60427 444 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 IGKV1D-16P01601 117 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 PNMTP11086 282 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 WT1P19544 449 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-205ENST00000469550 PSMB6P28072 239 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 TSPAN7P41732 249 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 FASLGP48023 281 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 OR1D5P58170 312 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 ZNF74Q16587 644 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 WDR38Q5JTN6 314 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 PRAMEF17Q5VTA0 474 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 VASH2Q86V25 355 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 PAQR4Q8N4S7 273 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-205ENST00000469550 OR4E2Q8NGC2 313 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 DOK4Q8TEW6 326 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 EXTL1Q92935 676 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 SEC22AQ96IW7 307 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 CCDC74BQ96LY2 380 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 PHB2Q99623 299 aa8.57□□□□□ -1.04
HDAC3-205ENST00000469550 SNRNP200O75643 2136 aaKnown RBP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 IGKV1D-42A0A075B6H8 117 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 IGHV1OR21-1A0A087WYE8 117 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 A0A1B0GTH9 108 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 M0QYG6 137 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 ZNF208O43345 1280 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 FOXS1O43638 330 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 CTSVO60911 334 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 ALOX12BO75342 701 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 EIF3GO75821 320 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 FAM157CP0CG43 387 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 NAT2P11245 290 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 IGFBP3P17936 291 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 FSTP19883 344 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 S1PR1P21453 382 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 HTR2CP28335 458 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 AQP2P41181 271 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 KCNJ3P48549 501 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 CYCSP99999 105 aaKnown RBP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 PDZK1IP1Q13113 114 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 ALG10Q5BKT4 473 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 BEX5Q5H9J7 111 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 TEX30Q5JUR7 227 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 EEF1A1P5Q5VTE0 462 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 AGBL5Q8NDL9 886 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 TMEM52Q8NDY8 209 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 OR4K17Q8NGC6 315 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 OR4A4PQ8NGN8 299 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 OR6S1Q8NH40 331 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 RXFP4Q8TDU9 374 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 TSEN15Q8WW01 171 aaKnown RBP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 ASB17Q8WXJ9 295 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 NKD1Q969G9 470 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 ANKRD9Q96BM1 317 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 FOXRED1Q96CU9 486 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 SAT2Q96F10 170 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 TSSK2Q96PF2 358 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 OR2M4Q96R27 311 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 OR8B4Q96RC9 309 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 INTS14Q96SY0 518 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 SLC6A7Q99884 636 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 CMSS1Q9BQ75 279 aaKnown RBP8.56□□□□□ -1.04
HDAC3-205ENST00000469550 NUDT22Q9BRQ3 303 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 G6PC3Q9BUM1 346 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 ACKR4Q9NPB9 350 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 IL17BQ9UHF5 180 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 TUBD1Q9UJT1 453 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 VSIG4Q9Y279 399 aa8.56□□□□□ -1.04
HDAC3-205ENST00000469550 SERINC4A6NH21 518 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 TVP23AA6NH52 213 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 ELOA3DA6NLF2 546 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-205ENST00000469550 OR6C76A6NM76 312 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 DBX1A6NMT0 343 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 COLCA2A8K830 154 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 BLOC1S5-TXNDC5H3BN57 136 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 AKR7A3O95154 331 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 DUS4LO95620 317 aaKnown RBP8.55□□□□□ -1.04
HDAC3-205ENST00000469550 RENP00797 406 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 CRHP06850 196 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 ACAA1P09110 424 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-205ENST00000469550 ASAH2BP0C7U1 165 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 CCL4P13236 92 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 RAB6AP20340 208 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 SLC6A9P48067 706 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 NPBWR1P48145 328 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 CX3CR1P49238 355 aa8.55□□□□□ -1.04
HDAC3-205ENST00000469550 AKR1C2P52895 323 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms