RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CENPMQ9NSP4 180 aa15.05■□□□□ -0
VPS52-214ENST00000463486 FN1P02751 2386 aaKnown RBP15.04■□□□□ -0
VPS52-214ENST00000463486 PRR32B1ATL7 298 aa15.04■□□□□ -0
VPS52-214ENST00000463486 ZNF878C9JN71 531 aa15.04■□□□□ -0
VPS52-214ENST00000463486 LILRA1O75019 489 aa15.04■□□□□ -0
VPS52-214ENST00000463486 LY6G6DO95868 133 aa15.04■□□□□ -0
VPS52-214ENST00000463486 LCATP04180 440 aa15.04■□□□□ -0
VPS52-214ENST00000463486 SLC25A16P16260 332 aa15.04■□□□□ -0
VPS52-214ENST00000463486 LIPAP38571 399 aa15.04■□□□□ -0
VPS52-214ENST00000463486 NR4A2P43354 598 aa15.04■□□□□ -0
VPS52-214ENST00000463486 PRKXP51817 358 aa15.04■□□□□ -0
VPS52-214ENST00000463486 CCL8P80075 99 aa15.04■□□□□ -0
VPS52-214ENST00000463486 PCGF3Q3KNV8 242 aa15.04■□□□□ -0
VPS52-214ENST00000463486 OR2T2Q6IF00 324 aa15.04■□□□□ -0
VPS52-214ENST00000463486 SLC16A9Q7RTY1 509 aa15.04■□□□□ -0
VPS52-214ENST00000463486 COPS4Q9BT78 406 aa15.04■□□□□ -0
VPS52-214ENST00000463486 C9orf16Q9BUW7 83 aa15.04■□□□□ -0
VPS52-214ENST00000463486 PRRG3Q9BZD7 231 aa15.04■□□□□ -0
VPS52-214ENST00000463486 YIPF3Q9GZM5 350 aa15.04■□□□□ -0
VPS52-214ENST00000463486 MSL2Q9HCI7 577 aa15.04■□□□□ -0
VPS52-214ENST00000463486 CYSLTR2Q9NS75 346 aa15.04■□□□□ -0
VPS52-214ENST00000463486 CGGBP1Q9UFW8 167 aaPredicted RBP15.04■□□□□ -0
VPS52-214ENST00000463486 YLPM1P49750 1951 aaKnown RBP15.04■□□□□ -0
VPS52-214ENST00000463486 SVEP1Q4LDE5 3571 aa15.03■□□□□ -0
VPS52-214ENST00000463486 SONP18583 2426 aaKnown RBP15.03■□□□□ -0
VPS52-214ENST00000463486 DLGAP1O14490 977 aa15.03■□□□□ -0
VPS52-214ENST00000463486 LYNP07948 512 aa15.03■□□□□ -0
VPS52-214ENST00000463486 ERCC1P07992 297 aaPredicted RBP15.03■□□□□ -0
VPS52-214ENST00000463486 CD55P08174 381 aa15.03■□□□□ -0
VPS52-214ENST00000463486 PRSS12P56730 875 aa15.03■□□□□ -0
VPS52-214ENST00000463486 RPS7P62081 194 aaKnown RBP15.03■□□□□ -0
VPS52-214ENST00000463486 LOXL1Q08397 574 aaPredicted RBP15.03■□□□□ -0
VPS52-214ENST00000463486 ZIK1Q3SY52 487 aaPredicted RBP15.03■□□□□ -0
VPS52-214ENST00000463486 OR8J1Q8NGP2 316 aa15.03■□□□□ -0
VPS52-214ENST00000463486 SNX33Q8WV41 574 aa15.03■□□□□ -0
VPS52-214ENST00000463486 RDH5Q92781 318 aa15.03■□□□□ -0
VPS52-214ENST00000463486 REPIN1Q9BWE0 567 aaKnown RBP15.03■□□□□ -0
VPS52-214ENST00000463486 TOR3AQ9H497 397 aa15.03■□□□□ -0
VPS52-214ENST00000463486 ADGRL4Q9HBW9 690 aa15.03■□□□□ -0
VPS52-214ENST00000463486 HAO2Q9NYQ3 351 aa15.03■□□□□ -0
VPS52-214ENST00000463486 ZNF319Q9P2F9 582 aa15.03■□□□□ -0
VPS52-214ENST00000463486 COPS3Q9UNS2 423 aa15.03■□□□□ -0
VPS52-214ENST00000463486 SPRY3O43610 288 aa15.02■□□□□ -0
VPS52-214ENST00000463486 TIMM8AO60220 97 aaPredicted RBP15.02■□□□□ -0
VPS52-214ENST00000463486 BAG2O95816 211 aa15.02■□□□□ -0
VPS52-214ENST00000463486 SLC2A1P11166 492 aa15.02■□□□□ -0
VPS52-214ENST00000463486 CRYBB2P43320 205 aa15.02■□□□□ -0
VPS52-214ENST00000463486 GRB2P62993 217 aaKnown RBP15.02■□□□□ -0
VPS52-214ENST00000463486 ZNF92Q03936 586 aa15.02■□□□□ -0
VPS52-214ENST00000463486 TSTQ16762 297 aaKnown RBP15.02■□□□□ -0
VPS52-214ENST00000463486 FAM209AQ5JX71 171 aa15.02■□□□□ -0
VPS52-214ENST00000463486 SLC25A30Q5SVS4 291 aa15.02■□□□□ -0
VPS52-214ENST00000463486 ZBTB49Q6ZSB9 765 aa15.02■□□□□ -0
VPS52-214ENST00000463486 EME1Q96AY2 570 aa15.02■□□□□ -0
VPS52-214ENST00000463486 BPESC1Q9GZL8 116 aa15.02■□□□□ -0
VPS52-214ENST00000463486 ZDHHC8Q9ULC8 765 aa15.02■□□□□ -0
VPS52-214ENST00000463486 ABCA2Q9BZC7 2435 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 IGHV4-61A0A0C4DH41 118 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 PLSCR5A0PG75 271 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 SLC22A31A6NKX4 558 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 IQCF6A8MYZ5 107 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 MT-ND5P03915 603 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 MRPL3P09001 348 aaKnown RBP15.01□□□□□ -0.01
VPS52-214ENST00000463486 ANPEPP15144 967 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 SLC15A1P46059 708 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 RAD23AP54725 363 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 GLYATL3Q5SZD4 288 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 LCN1P1Q5VSP4 162 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 RFLNBQ8N5W9 214 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 OR8G5Q8NG78 346 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 OR2AE1Q8NHA4 323 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 THEM6Q8WUY1 208 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 TRUB1Q8WWH5 349 aaKnown RBP15.01□□□□□ -0.01
VPS52-214ENST00000463486 SPSB4Q96A44 273 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 ZNF582Q96NG8 517 aaPredicted RBP15.01□□□□□ -0.01
VPS52-214ENST00000463486 SLC30A2Q9BRI3 323 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 PIMREGQ9BSJ6 248 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 CHODLQ9H9P2 273 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 CACNG2Q9Y698 323 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 HIVEP2P31629 2446 aa15.01□□□□□ -0.01
VPS52-214ENST00000463486 HEXAP06865 529 aa15□□□□□ -0.01
VPS52-214ENST00000463486 TACSTD2P09758 323 aa15□□□□□ -0.01
VPS52-214ENST00000463486 GABRB1P18505 474 aa15□□□□□ -0.01
VPS52-214ENST00000463486 ACHEP22303 614 aa15□□□□□ -0.01
VPS52-214ENST00000463486 USF1P22415 310 aaPredicted RBP15□□□□□ -0.01
VPS52-214ENST00000463486 HTR1FP30939 366 aa15□□□□□ -0.01
VPS52-214ENST00000463486 SLC6A9P48067 706 aa15□□□□□ -0.01
VPS52-214ENST00000463486 CX3CR1P49238 355 aa15□□□□□ -0.01
VPS52-214ENST00000463486 SNRPGP62308 76 aaKnown RBP15□□□□□ -0.01
VPS52-214ENST00000463486 ROM1Q03395 351 aa15□□□□□ -0.01
VPS52-214ENST00000463486 HNRNPA0Q13151 305 aaKnown RBP15□□□□□ -0.01
VPS52-214ENST00000463486 TAF13Q15543 124 aa15□□□□□ -0.01
VPS52-214ENST00000463486 CARTPTQ16568 116 aa15□□□□□ -0.01
VPS52-214ENST00000463486 LRRN1Q6UXK5 716 aa15□□□□□ -0.01
VPS52-214ENST00000463486 CLEC9AQ6UXN8 241 aa15□□□□□ -0.01
VPS52-214ENST00000463486 USP51Q70EK9 711 aa15□□□□□ -0.01
VPS52-214ENST00000463486 GID4Q8IVV7 300 aa15□□□□□ -0.01
VPS52-214ENST00000463486 OR5AS1Q8N127 324 aa15□□□□□ -0.01
VPS52-214ENST00000463486 STMN2Q93045 179 aa15□□□□□ -0.01
VPS52-214ENST00000463486 SGK3Q96BR1 496 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms