RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SPTBN1Q01082 2364 aaKnown RBP9.26□□□□□ -0.93
RTF1-202ENST00000462276 LOC100509620A0A075B734 347 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 NKX2-6A6NCS4 301 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 OR4C45A6NMZ5 311 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 E9PI62 339 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 J3QKU1 62 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 CASKO14936 926 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 MAGEB4O15481 346 aaPredicted RBP9.26□□□□□ -0.93
RTF1-202ENST00000462276 AGFG2O95081 481 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 GOSR1O95249 250 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 CRYAAP02489 173 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 LCATP04180 440 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 HLA-DPB1P04440 258 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 ANXA2P07355 339 aaKnown RBP9.26□□□□□ -0.93
RTF1-202ENST00000462276 ZNF35P13682 527 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 GABRA5P31644 462 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 RAD52P43351 418 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 SLC6A9P48067 706 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 ZNF121P58317 390 aaPredicted RBP9.26□□□□□ -0.93
RTF1-202ENST00000462276 TUBA1BP68363 451 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 MALLQ13021 153 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 YIF1BQ5BJH7 314 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 BCL2L15Q5TBC7 163 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 PAMR1Q6UXH9 720 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 TUBA1AQ71U36 451 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 PRSS45Q7RTY3 260 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 OR13F1Q8NGS4 319 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 OR5AK2Q8NH90 309 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 GHSRQ92847 366 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
RTF1-202ENST00000462276 PGAM5Q96HS1 289 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 WFIKKN1Q96NZ8 548 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 OPALINQ96PE5 141 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 KCNS3Q9BQ31 491 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 BCL2L14Q9BZR8 327 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 PBOV1Q9GZY1 135 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 ESRP2Q9H6T0 727 aaKnown RBP9.26□□□□□ -0.93
RTF1-202ENST00000462276 NOX3Q9HBY0 568 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 NDUFB11Q9NX14 153 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 FRRS1LQ9P0K9 344 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 ST6GALNAC2Q9UJ37 374 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 ZNF281Q9Y2X9 895 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 GRIP1Q9Y3R0 1128 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 ARHGAP21Q5T5U3 1957 aa9.26□□□□□ -0.93
RTF1-202ENST00000462276 ANKHD1Q8IWZ3 2542 aaKnown RBP9.26□□□□□ -0.93
RTF1-202ENST00000462276 IGHV1-18A0A0C4DH31 117 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 SMIM31A0A1B0GVY4 71 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 LOC390937A0A1W2PQ73 354 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 DHRS7CA6NNS2 312 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 VSTM5A8MXK1 200 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 H3BSA7 217 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 XRCC2O43543 280 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 MTRF1O75570 445 aaKnown RBP9.25□□□□□ -0.93
RTF1-202ENST00000462276 GATBO75879 557 aaKnown RBP9.25□□□□□ -0.93
RTF1-202ENST00000462276 ZFPL1O95159 310 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 PNPP00491 289 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 DBHP09172 617 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 CECR9P0C854 216 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 PLA2G2AP14555 144 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 CD40P25942 277 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 PSMB10P40306 273 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 GTF2A1P52655 376 aaPredicted RBP9.25□□□□□ -0.93
RTF1-202ENST00000462276 GP2P55259 537 aaKnown RBP9.25□□□□□ -0.93
RTF1-202ENST00000462276 NAAAQ02083 359 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 WDR38Q5JTN6 314 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 ZNF676Q8N7Q3 588 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 GPR148Q8TDV2 347 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 SSC4DQ8WTU2 575 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 FAM222BQ8WU58 562 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 AKAP1Q92667 903 aaKnown RBP eCLIP9.25□□□□□ -0.93
RTF1-202ENST00000462276 C10orf35Q96D05 121 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 BCL7BQ9BQE9 202 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 TTTY10Q9BZA0 68 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 G6PC2Q9NQR9 355 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 HHLA2Q9UM44 414 aa9.25□□□□□ -0.93
RTF1-202ENST00000462276 NAV2Q8IVL1 2488 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 A0A1B0GVI7 797 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 A0A1W2PR80 420 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 CYSRT1A8MQ03 144 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 LALBAP00709 142 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 RAF1P04049 648 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 THBDP07204 575 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 CD36P16671 472 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 ACHEP22303 614 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 CCL1P22362 96 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 CCNOP22674 350 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 MAPK3P27361 379 aaPredicted RBP9.24□□□□□ -0.93
RTF1-202ENST00000462276 LIPAP38571 399 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 DDOSTP39656 456 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 KIR2DL3P43628 341 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 ZNF83P51522 516 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 UCP2P55851 309 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 NANOS3P60323 173 aaKnown RBP9.24□□□□□ -0.93
RTF1-202ENST00000462276 RPS23P62266 143 aaKnown RBP9.24□□□□□ -0.93
RTF1-202ENST00000462276 SLC3A1Q07837 685 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 TSTQ16762 297 aaKnown RBP9.24□□□□□ -0.93
RTF1-202ENST00000462276 BEX5Q5H9J7 111 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 LIPKQ5VXJ0 399 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 CD200R1LQ6Q8B3 271 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 Q6ZSR3 168 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms