RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PXT1Q8NFP0 134 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 OR1S2Q8NGQ3 325 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 CCNL2Q96S94 520 aaPredicted RBP11.06□□□□□ -0.64
LINC00959-201ENST00000456581 VRK1Q99986 396 aaPredicted RBP11.06□□□□□ -0.64
LINC00959-201ENST00000456581 ABHD6Q9BV23 337 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 ZNF471Q9BX82 626 aaPredicted RBP11.06□□□□□ -0.64
LINC00959-201ENST00000456581 SLC5A6Q9Y289 635 aa11.06□□□□□ -0.64
LINC00959-201ENST00000456581 RFPL4AA6NLU0 287 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 OR6C76A6NM76 312 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 KRBOX1C9JBD0 128 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 RFPL4AL1F8VTS6 287 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 ZNF735P0CB33 412 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 ADCYAP1P18509 176 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 RASGEF1BQ0VAM2 473 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 PMPCAQ10713 525 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 JMJD6Q6NYC1 403 aaPredicted RBP11.05□□□□□ -0.64
LINC00959-201ENST00000456581 PPP1R1CQ8WVI7 109 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 FBXO9Q9UK97 447 aaPredicted RBP11.05□□□□□ -0.64
LINC00959-201ENST00000456581 A0A1W2PQD3 144 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 EEF1E1-BLOC1S5C9J1V9 151 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 P2RY10O00398 339 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 IL32P24001 234 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 CTAG1AP78358 180 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 MC2RQ01718 297 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 EGR3Q06889 387 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 PPP1R1AQ13522 171 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 CDNFQ49AH0 187 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 FAM166AQ6J272 317 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 OR2W3Q7Z3T1 314 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 CPEB2Q7Z5Q1 589 aaKnown RBP11.05□□□□□ -0.64
LINC00959-201ENST00000456581 TMEM200AQ86VY9 491 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 TMEM105Q8N8V8 129 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 ADAD2Q8NCV1 583 aaKnown RBP11.05□□□□□ -0.64
LINC00959-201ENST00000456581 OR10G3Q8NGC4 313 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 OR6K3Q8NGY3 331 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 LIPHQ8WWY8 451 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 CST11Q9H112 138 aa11.05□□□□□ -0.64
LINC00959-201ENST00000456581 DMXL1Q9Y485 3027 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 TRAV36DV7A0A075B6V5 113 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 PRSS37A4D1T9 235 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 PMS2P1A4D2B8 440 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 RNF222A6NCQ9 220 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 TUBAL3A6NHL2 446 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 H3BML4 177 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 TXNDC12O95881 172 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 CD34P28906 385 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 AKR1D1P51857 326 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 GMFBP60983 142 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 C1orf140Q5VVS0 124 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 ZNF679Q8IYX0 411 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 CHST4Q8NCG5 386 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 OR13C3Q8NGS6 347 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 ZNF587Q96SQ5 575 aaPredicted RBP11.04□□□□□ -0.64
LINC00959-201ENST00000456581 PTGES2Q9H7Z7 377 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 VSTM2BA6NLU5 285 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 ZNF736B4DX44 427 aaPredicted RBP11.04□□□□□ -0.64
LINC00959-201ENST00000456581 OR2T1O43869 369 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 CYB5AP00167 134 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 RPA2P15927 270 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 AKR1C4P17516 323 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 VAMP1P23763 118 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 CALCRP30988 508 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 NAXDQ8IW45 347 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 NAT6Q93015 286 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 SOX7Q9BT81 388 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 CENPMQ9NSP4 180 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 LOC107986453A0A1B0GWG9 222 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 NPIPB7O75200 414 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 GNB3P16520 340 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 PI3P19957 117 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 STARP49675 285 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 TAS2R19P59542 299 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 CXADRP78310 365 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 BAMBIQ13145 260 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 MAMDC2Q7Z304 686 aaPredicted RBP11.04□□□□□ -0.64
LINC00959-201ENST00000456581 LINC00518Q8N0U6 118 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 ZFP82Q8N141 532 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 RNF128Q8TEB7 428 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 ZNF416Q9BWM5 594 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 MED29Q9NX70 200 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 TAS2R8Q9NYW2 309 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 KLRF1Q9NZS2 232 aa11.04□□□□□ -0.64
LINC00959-201ENST00000456581 CFAP47Q6ZTR5 3102 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 IGLV1-36A0A0B4J1U3 117 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 MPTX1A8MV57 137 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 EFNA2O43921 213 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 DLSTP36957 453 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 DNASE1L1P49184 302 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 POLR2HP52434 150 aaKnown RBP11.03□□□□□ -0.64
LINC00959-201ENST00000456581 SLC26A5P58743 744 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 PDSS1Q5T2R2 415 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 CDCP2Q5VXM1 449 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 DCXRQ7Z4W1 244 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 HSD17B13Q7Z5P4 300 aaPredicted RBP11.03□□□□□ -0.64
LINC00959-201ENST00000456581 FJX1Q86VR8 437 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 PUSL1Q8N0Z8 303 aaKnown RBP11.03□□□□□ -0.64
LINC00959-201ENST00000456581 C2CD4CQ8TF44 421 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 OIT3Q8WWZ8 545 aa11.03□□□□□ -0.64
LINC00959-201ENST00000456581 MRI1Q9BV20 369 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms