RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CT45A5P0DMU8 189 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CT45A7P0DMV0 189 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SLC2A2P11168 524 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 TCP1P17987 556 aaKnown RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 RAB5AP20339 215 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 GPD1P21695 349 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 LOXP28300 417 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 GPR183P32249 361 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SHMT2P34897 504 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 HRH1P35367 487 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 HOXA1P49639 335 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SULT1A1P50225 295 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SULT1A2P50226 295 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 PPOXP50336 477 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SUB1P53999 127 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 TAS2R39P59534 338 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 RPS27AP62979 156 aaKnown RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SEMG2Q02383 582 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF91Q05481 1191 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 KIR2DS3Q14952 304 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZIC1Q15915 447 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CT45A1Q5HYN5 189 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ACER2Q5QJU3 275 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 FAM120AOSQ5T036 256 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 TFAP2EQ6VUC0 442 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF771Q7L3S4 317 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 TMEM150AQ86TG1 271 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CPNE9Q8IYJ1 553 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 TMEM199Q8N511 208 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 METTL13Q8N6R0 699 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CT45A3Q8NHU0 189 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 KCTD4Q8WVF5 259 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 FGF11Q92914 225 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 MRAP2Q96G30 205 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 C2orf48Q96LS8 159 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 KCTD14Q9BQ13 255 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 RHNO1Q9BSD3 238 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 SLC25A33Q9BSK2 321 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CSTL1Q9H114 145 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CLMPQ9H6B4 373 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 REEP1Q9H902 201 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 UGT1A7Q9HAW7 530 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 TAS2R13Q9NYV9 303 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF224Q9NZL3 707 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 CES1P1Q9UKY3 287 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 KLF12Q9Y4X4 402 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 HS3ST3B1Q9Y662 390 aa3.69□□□□□ -1.82
HMGB3P21-201ENST00000452483 IGLV3-22A0A075B6J6 115 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 DAPL1A0PJW8 107 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 LINC01553A4QN01 128 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 LOC110117498-PIK3R3F6TDL0 507 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 MGST3O14880 152 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 MBTPS2O43462 519 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 RAD51CO43502 376 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 PI15O43692 258 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 SYNGR1O43759 233 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 TYROBPO43914 113 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZG16O60844 167 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 SUPT3HO75486 399 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR2B3O76000 313 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 CD8AP01732 235 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 PCCAP05165 728 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR5AL1P0C617 328 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 LINC00614P0C842 121 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ICAM2P13598 275 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ALOX5APP20292 161 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ELK4P28324 431 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ADORA1P30542 326 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 CCKARP32238 428 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 SOX3P41225 446 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 AMTP48728 403 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 TTPAP49638 278 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 AP1S2P56377 157 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 BTN3A2P78410 334 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 PTGR1Q14914 329 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF169Q14929 603 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 NFATC4Q14934 902 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 TRIP6Q15654 476 aaKnown RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ATP6AP1Q15904 470 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 CYP51A1Q16850 503 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ECSCRQ19T08 205 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 HLA-DRB5Q30154 266 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ARHGAP11BQ3KRB8 267 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF260Q3ZCT1 412 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 UBE2UQ5VVX9 321 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 WDR25Q64LD2 544 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 TMEM42Q69YG0 159 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 SUMO4Q6EEV6 95 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 PRSS41Q7RTY9 318 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 THOC6Q86W42 341 aaKnown RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 NATD1Q8N6N6 113 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 NEXN-AS1Q8NBZ9 246 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 OR4K17Q8NGC6 315 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 RFESDQ8TAC1 157 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 C11orf45Q8TAV5 145 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 ZNF564Q8TBZ8 553 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 RNF138Q8WVD3 245 aa3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 PCNPQ8WW12 178 aaKnown RBP3.68□□□□□ -1.82
HMGB3P21-201ENST00000452483 IGFBPL1Q8WX77 278 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms