RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 NAT6Q93015 286 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 FAM3DQ96BQ1 224 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 SLC25A44Q96H78 314 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 PLEKHA1Q9HB21 404 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 GLRX2Q9NS18 164 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 ETV7Q9Y603 341 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 TRAV18A0A075B6X5 111 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 TMEM269A0A1B0GVZ9 245 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 A6NIZ1 184 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 LGALS8O00214 317 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 CTAG2O75638 210 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 GLSO94925 669 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 PSMB1P20618 241 aaKnown RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 CDAP32320 146 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 SUMO3P55854 103 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 RAP1BP61224 184 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 RAP1AP62834 184 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 ZP4Q12836 540 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 LINC00303Q3SY05 128 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 KRBOX4Q5JUW0 171 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 GLYATL3Q5SZD4 288 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 OR10K2Q6IF99 312 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 Q6ZTK2 550 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 OR11H4Q8NGC9 324 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 OR56B4Q8NH76 319 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 MR1Q95460 341 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 HYLS1Q96M11 299 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 CMKLR1Q99788 373 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 DPCDQ9BVM2 203 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 NDRG3Q9UGV2 375 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 UBQLN2Q9UHD9 624 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 LOC107986453A0A1B0GWG9 222 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 ANKRD20A5PA0PJZ0 165 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 P2RY10O00398 339 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 ZNF208O43345 1280 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 IFNA7P01567 189 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 ANGPT1Q15389 498 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 RAB11BQ15907 218 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 OVCH2Q7RTZ1 564 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 WDSUB1Q8N9V3 476 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 OR13C3Q8NGS6 347 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 C11orf40Q8WZ69 217 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 SPACA9Q96E40 222 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 OR2M2Q96R28 347 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 C7orf50Q9BRJ6 194 aaKnown RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 SOX7Q9BT81 388 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 OPN3Q9H1Y3 402 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 SEC61A2Q9H9S3 476 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 G6PC2Q9NQR9 355 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 OR52A1Q9UKL2 312 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 CDV3Q9UKY7 258 aaKnown RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 PTRH2Q9Y3E5 179 aaKnown RBP10.75□□□□□ -0.69
COL27A1-202ENST00000451716 R4GMQ9 66 aa10.75□□□□□ -0.69
COL27A1-202ENST00000451716 BDP1A6H8Y1 2624 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 A0A1W2PPL8 197 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ACOT7O00154 380 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 XRCC3O43542 346 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 TOXO94900 526 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ANXA7P20073 488 aaKnown RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 RAD52P43351 418 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 FGL1Q08830 312 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 PCGF3Q3KNV8 242 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 TMEM176BQ3YBM2 270 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 OR2M3Q8NG83 312 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 MRGPRX4Q96LA9 322 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ZMAT3Q9HA38 289 aaKnown RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 EMC7Q9NPA0 242 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ZFP64Q9NPA5 681 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ALKBH4Q9NXW9 302 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 AKAP7Q9P0M2 348 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 C19orf25Q9UFG5 118 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 PURGQ9UJV8 347 aaKnown RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 MGAT4AQ9UM21 535 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 KCNK7Q9Y2U2 307 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 MRPS18BQ9Y676 258 aaKnown RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 AHCTF1Q8WYP5 2266 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 GGT3PA6NGU5 568 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 A6NJY4 79 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 HSPB2A8KAH6 182 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 D6RAR5 112 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 SRSF10O75494 262 aaKnown RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 H2BFMP0C1H6 154 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ZP1P60852 638 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 PCOLCEQ15113 449 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 HSPB2Q16082 182 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ZNF528Q3MIS6 628 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ANKRD16Q6P6B7 361 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 RAB11FIP2Q7L804 512 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 JAGN1Q8N5M9 183 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ZNF454Q8N9F8 522 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 OR4K17Q8NGC6 315 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 RNF138Q8WVD3 245 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 WBP1Q96G27 269 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 MEGF10Q96KG7 1140 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 CMSS1Q9BQ75 279 aaKnown RBP10.74□□□□□ -0.69
COL27A1-202ENST00000451716 MRI1Q9BV20 369 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 GPR61Q9BZJ8 451 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 ATG5Q9H1Y0 275 aa10.74□□□□□ -0.69
COL27A1-202ENST00000451716 NOX3Q9HBY0 568 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms