RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SPACA9Q96E40 222 aaPredicted RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 CCDC74BQ96LY2 380 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 GABRG3Q99928 467 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 VN1R1Q9GZP7 353 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 CELA2BP08218 269 aaPredicted RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 ZNF121P58317 390 aaPredicted RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 AKR1C1Q04828 323 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 CD300CQ08708 224 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 TOMM34Q15785 309 aaPredicted RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 KCNRGQ8N5I3 272 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 DMBX1Q8NFW5 382 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 TMED6Q8WW62 240 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 TAF9BQ9HBM6 251 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 PRMT8Q9NR22 394 aaPredicted RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 SCN3AQ9NY46 2000 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 OTOL1A6NHN0 477 aaPredicted RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 PYCARD-AS1I3L0S3 204 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 EFSO43281 561 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 SSX4O60224 188 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 CDKN2AP42771 156 aaKnown RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 MAGEB1P43366 347 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 TLE4Q04727 773 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 PLGLAQ15195 96 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 ATPAF1Q5TC12 328 aaPredicted RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 WDSUB1Q8N9V3 476 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 ZNF610Q8N9Z0 462 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 EMG1Q92979 244 aaKnown RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 SPACA1Q9HBV2 294 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 LANCL2Q9NS86 450 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 GPR160Q9UJ42 338 aa9.39□□□□□ -0.91
CTC1-202ENST00000449476 PCYT1BQ9Y5K3 369 aaPredicted RBP9.39□□□□□ -0.91
CTC1-202ENST00000449476 SHISA8B8ZZ34 492 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 MPPED1O15442 326 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 C1QCP02747 245 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 TBPP20226 339 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 PTGER4P35408 488 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 LAIR1Q6GTX8 287 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 EXD3Q8N9H8 876 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 RELL2Q8NC24 303 aaPredicted RBP9.38□□□□□ -0.91
CTC1-202ENST00000449476 SLC30A7Q8NEW0 376 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 OR51H1Q8NH63 302 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 C4orf45Q96LM5 186 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 CRISPLD2Q9H0B8 497 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 A0A1W2PPV9 198 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 FAM221AA4D161 298 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 NRASP01111 189 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 GRPP07492 148 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 H3F3CQ6NXT2 135 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 YIPF5Q969M3 257 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 WDR89Q96FK6 387 aaPredicted RBP9.38□□□□□ -0.91
CTC1-202ENST00000449476 LRRC3BQ96PB8 259 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 PARP12Q9H0J9 701 aaKnown RBP9.38□□□□□ -0.91
CTC1-202ENST00000449476 SLCO1B1Q9Y6L6 691 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 ZNF831Q5JPB2 1677 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 CACNA1IQ9P0X4 2223 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 ATAD5Q96QE3 1844 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 TXNL1O43396 289 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 CDAP32320 146 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 NKX2-1P43699 371 aaPredicted RBP9.38□□□□□ -0.91
CTC1-202ENST00000449476 CCL11P51671 97 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 LSM11P83369 360 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTC1-202ENST00000449476 BAMBIQ13145 260 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 TFAP2EQ6VUC0 442 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 NLRC3Q7RTR2 1065 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.38□□□□□ -0.91
CTC1-202ENST00000449476 OR13C8Q8NGS7 320 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 OR1L3Q8NH93 324 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 CMTM3Q96MX0 182 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 FLVCR1Q9Y5Y0 555 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 SPTA1P02549 2419 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 CKAP5Q14008 2032 aa9.38□□□□□ -0.91
CTC1-202ENST00000449476 A0A1B0GTH9 108 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 H7C1Q1 480 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 DEGS1O15121 323 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 NXPH3O95157 252 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 NTN1O95631 604 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 GSTP1P09211 210 aaKnown RBP9.37□□□□□ -0.91
CTC1-202ENST00000449476 MGMTP16455 207 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 SSBP1Q04837 148 aaKnown RBP9.37□□□□□ -0.91
CTC1-202ENST00000449476 FMODQ06828 376 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 CLN3Q13286 438 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 HMGN3Q15651 99 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 ZNF141Q15928 474 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 ST7LQ8TDW4 575 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 MENTQ9BUN1 341 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 BARHL1Q9BZE3 327 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 SLC52A3Q9NQ40 469 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 SLC39A9Q9NUM3 307 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 NRXN2Q9P2S2 1712 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 IGHV1OR21-1A0A087WYE8 117 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 A8MXE2 369 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 K7EQS6 105 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 HSD17B6O14756 317 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 HS3ST1O14792 307 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 GLSO94925 669 aaPredicted RBP9.37□□□□□ -0.91
CTC1-202ENST00000449476 GPANK1O95872 356 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 WNT1P04628 370 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 FOLR1P15328 257 aa9.37□□□□□ -0.91
CTC1-202ENST00000449476 MVDP53602 400 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms