RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 THRAP10827 490 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 UCHL3P15374 230 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 UGT2B7P16662 529 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 SDC1P18827 310 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 NTSP30990 170 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 GPR183P32249 361 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 PEX3P56589 373 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 RND3P61587 244 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 SP4Q02446 784 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 ST3GAL4Q11206 333 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 TFDP2Q14188 446 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 GGTLC2Q14390 218 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 ARL6IP1Q15041 203 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 TMEM176BQ3YBM2 270 aaPredicted RBP3.7□□□□□ -1.82
VPS50-206ENST00000443443 OR10J3Q5JRS4 329 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 SYPL2Q5VXT5 272 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 PVRIGQ6DKI7 326 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 RWDD4Q6NW29 188 aaKnown RBP3.7□□□□□ -1.82
VPS50-206ENST00000443443 FAM199XQ6PEV8 388 aaPredicted RBP3.7□□□□□ -1.82
VPS50-206ENST00000443443 ADAMTSL5Q6ZMM2 481 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 MBOAT2Q6ZWT7 520 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 CA13Q8N1Q1 262 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 LINC00612Q8N6U2 182 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 OR2AE1Q8NHA4 323 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 NTNG2Q96CW9 530 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 ADTRPQ96IZ2 230 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 SLC45A3Q96JT2 553 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 Q96MT0 163 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 TRABDQ9H4I3 376 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 CAB39LQ9H9S4 337 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 DIABLOQ9NR28 239 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 VNN3Q9NY84 501 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 PRODH2Q9UF12 536 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 BTNL2Q9UIR0 455 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 MGAT4AQ9UM21 535 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 MRPS18BQ9Y676 258 aaKnown RBP3.7□□□□□ -1.82
VPS50-206ENST00000443443 ARL5AQ9Y689 179 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 KIAA0232Q92628 1395 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 ADAMTS9Q9P2N4 1935 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 ZNF532Q9HCE3 1301 aa3.7□□□□□ -1.82
VPS50-206ENST00000443443 MYH14Q7Z406 1995 aaKnown RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 A0A0B4J2E0 115 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 IQCMA0A1B0GVH7 501 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 A0A1B0GX12 115 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 F5H768 121 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 J3QLI3 93 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 CCRL2O00421 344 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 MRPS12O15235 138 aaKnown RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 SURF4O15260 269 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 PHF1O43189 567 aaPredicted RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 FGF16O43320 207 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TYROBPO43914 113 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 GLSO94925 669 aaPredicted RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 RLN2P04090 185 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 C8orf88P0DMB2 117 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 LIPCP11150 499 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 CBR1P16152 277 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 IGFBP3P17936 291 aaPredicted RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 BCL3P20749 454 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 F8A1P23610 371 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 GSSP48637 474 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 CYB561P49447 251 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 SERPINB8P50452 374 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 ATP4BP51164 291 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 HNRNPA3P51991 378 aaKnown RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 STC1P52823 247 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 RAB8AP61006 207 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 SPCS3P61009 180 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 BCL2L1Q07817 233 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 SLC39A6Q13433 755 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 ABRAXAS2Q15018 415 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TAF1AQ15573 450 aaPredicted RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 ZBED5Q49AG3 693 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TRIM40Q6P9F5 258 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 FAM131AQ6UXB0 335 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TMED4Q7Z7H5 227 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 SLC51BQ86UW2 128 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 OR9A4Q8NGU2 314 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 GATAD1Q8WUU5 269 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 PCNPQ8WW12 178 aaKnown RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 EEF1AKMT3Q96AZ1 226 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TESCQ96BS2 214 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 RCN3Q96D15 328 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 MS4A14Q96JA4 679 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 C2orf48Q96LS8 159 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 KCTD7Q96MP8 289 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 SCGB3A2Q96PL1 93 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TBX15Q96SF7 602 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 HBEGFQ99075 208 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TEAD3Q99594 435 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 APOL4Q9BPW4 351 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 KCTD14Q9BQ13 255 aaPredicted RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 NUDT9Q9BW91 350 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 NXF2Q9GZY0 626 aaKnown RBP3.69□□□□□ -1.82
VPS50-206ENST00000443443 FAM107BQ9H098 131 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 NT5DC2Q9H857 520 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TMEM27Q9HBJ8 222 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 ZDHHC4Q9NPG8 344 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 TIGARQ9NQ88 270 aa3.69□□□□□ -1.82
VPS50-206ENST00000443443 C12orf4Q9NQ89 552 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms