RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SIAEQ9HAT2 523 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 NRIP3Q9NQ35 241 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 GPR160Q9UJ42 338 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 LRRC42Q9Y546 428 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 LRP5LA4QPB2 252 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 SNTNA6NMZ2 147 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 NUDT19A8MXV4 375 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 LYNX1G3V0Z9 82 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 BHLHE40O14503 412 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 IGFBP1P08833 259 aaPredicted RBP7.52□□□□□ -1.21
USP6NL-203ENST00000443016 LYNX1P0DP58 116 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 EPHA2P29317 976 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 CENPAP49450 140 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 RPL27P61353 136 aaKnown RBP7.52□□□□□ -1.21
USP6NL-203ENST00000443016 ERVK-25P63136 954 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 FMODQ06828 376 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 KRR1Q13601 381 aaKnown RBP7.52□□□□□ -1.21
USP6NL-203ENST00000443016 FHL1Q13642 323 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 MAD2L1BPQ15013 274 aaPredicted RBP7.52□□□□□ -1.21
USP6NL-203ENST00000443016 ALKBH6Q3KRA9 238 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 TMEM236Q5W0B7 351 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 PTCHD4Q6ZW05 846 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 LRP11Q86VZ4 500 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 ZNF786Q8N393 782 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 OR4Q3Q8NH05 313 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 SNX33Q8WV41 574 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 C11orf40Q8WZ69 217 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 MSI2Q96DH6 328 aaKnown RBP7.52□□□□□ -1.21
USP6NL-203ENST00000443016 Q96MT0 163 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 SNX18Q96RF0 628 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 FN3KQ9H479 309 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 CMC2Q9NRP2 79 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 TBCCD1Q9NVR7 557 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 TVP23BQ9NYZ1 205 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 ZNF346Q9UL40 294 aaKnown RBP7.52□□□□□ -1.21
USP6NL-203ENST00000443016 IER3IP1Q9Y5U9 82 aa7.52□□□□□ -1.21
USP6NL-203ENST00000443016 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.21
USP6NL-203ENST00000443016 TEX13CA0A0J9YWL9 993 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 RENP00797 406 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 FAM157CP0CG43 387 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 APEX1P27695 318 aaKnown RBP7.51□□□□□ -1.21
USP6NL-203ENST00000443016 CHN2P52757 468 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 KLF3P57682 345 aaPredicted RBP7.51□□□□□ -1.21
USP6NL-203ENST00000443016 MRPS34P82930 218 aaKnown RBP7.51□□□□□ -1.21
USP6NL-203ENST00000443016 MSMPQ1L6U9 139 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 PABPC1L2AQ5JQF8 200 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 THEM4Q5T1C6 240 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 C10orf128Q5T292 105 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 LRRC75AQ8NAA5 344 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 FNDC8Q8TC99 324 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 BCL2L14Q9BZR8 327 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 LPAR3Q9UBY5 353 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 ADAM18Q9Y3Q7 739 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 SURF4O15260 269 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 CLIC3O95833 236 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 TXNDC12O95881 172 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 CSF1P09603 554 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 HNF1AP20823 631 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 MAPK3P27361 379 aaPredicted RBP7.51□□□□□ -1.21
USP6NL-203ENST00000443016 UCP2P55851 309 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 TEKQ02763 1124 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.51□□□□□ -1.21
USP6NL-203ENST00000443016 MEDAGQ5VYS4 303 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 TMEM154Q6P9G4 183 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 UNQ6126/PRO20091Q6UXV3 157 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 PAQR4Q8N4S7 273 aaPredicted RBP7.51□□□□□ -1.21
USP6NL-203ENST00000443016 ARIH2OSQ8N7S6 290 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 BVESQ8NE79 360 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 SYNPRQ8TBG9 265 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 TMEM163Q8TC26 289 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 TSPAN32Q96QS1 320 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 ALG12Q9BV10 488 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 CLN6Q9NWW5 311 aa7.51□□□□□ -1.21
USP6NL-203ENST00000443016 MYEF2Q9P2K5 600 aaKnown RBP7.51□□□□□ -1.21
USP6NL-203ENST00000443016 EIF3KQ9UBQ5 218 aaKnown RBP7.51□□□□□ -1.21
USP6NL-203ENST00000443016 PRR23D1E9PI22 279 aaPredicted RBP7.5□□□□□ -1.21
USP6NL-203ENST00000443016 E9PQ18 207 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 MT-ND5P03915 603 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 GNAO1P09471 354 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 PRR23D2P0DMB1 279 aaPredicted RBP7.5□□□□□ -1.21
USP6NL-203ENST00000443016 ZNF32P17041 273 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 SRD5A1P18405 259 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 STOMP27105 288 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 GIFP27352 417 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 TBCEQ15813 527 aaPredicted RBP7.5□□□□□ -1.21
USP6NL-203ENST00000443016 SLC35F1Q5T1Q4 408 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 ACSM5Q6NUN0 579 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 DNM1P34Q6PK57 102 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 FAM122BQ7Z309 247 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 GID4Q8IVV7 300 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 TCEANCQ8N8B7 351 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 ZNF519Q8TB69 540 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 RFKQ969G6 155 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 OTULINQ96BN8 352 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 Q96M85 177 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 NARFLQ9H6Q4 476 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 SLCO1C1Q9NYB5 712 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 TAAR3PQ9P1P4 343 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 IGKV1D-43A0A0B4J1Z2 117 aa7.5□□□□□ -1.21
USP6NL-203ENST00000443016 C5orf49A4QMS7 147 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms