RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 H0YAE9 185 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 MPZL2O60487 215 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 LY6HO94772 140 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 ADRA2AP08913 450 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 DBTP11182 482 aaKnown RBP13.7□□□□□ -0.22
USP39-205ENST00000442708 SLC15A1P46059 708 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 SLC6A9P48067 706 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 PPOXP50336 477 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 ATP5J2P56134 94 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 ROM1Q03395 351 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 POU4F2Q12837 409 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 LAIR2Q6ISS4 152 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 UNQ6126/PRO20091Q6UXV3 157 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 FBXW12Q6X9E4 464 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 USP51Q70EK9 711 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 KRT77Q7Z794 578 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 C1orf174Q8IYL3 243 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 LRRC75A-AS1Q8N1F1 130 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 ZNF283Q8N7M2 679 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 HAVCR1Q96D42 359 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 LGALS12Q96DT0 336 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 OR8B4Q96RC9 309 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 VCXQ9H320 206 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 TPK1Q9H3S4 243 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 ZNF319Q9P2F9 582 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP39-205ENST00000442708 N6AMT1Q9Y5N5 214 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 PMF1-BGLAPU3KQ54 211 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 ITPR3Q14573 2671 aa13.7□□□□□ -0.22
USP39-205ENST00000442708 ZNF670-ZNF695F2Z2N8 137 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 H0YJX3 145 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 H3BSA7 217 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 J3QW42 95 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 OR2T7P0C7T2 308 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 NAT2P11245 290 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 HSD11B1P28845 292 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 GCH1P30793 250 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 MMP15P51511 669 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 ZNF121P58317 390 aaPredicted RBP13.69□□□□□ -0.22
USP39-205ENST00000442708 ZNF85Q03923 595 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 GK2Q14410 553 aaPredicted RBP13.69□□□□□ -0.22
USP39-205ENST00000442708 GLYATL3Q5SZD4 288 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 ZNF684Q5T5D7 378 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 ZNF322Q6U7Q0 402 aaPredicted RBP13.69□□□□□ -0.22
USP39-205ENST00000442708 OR10H4Q8NGA5 316 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 OR2T27Q8NH04 317 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 OR2AE1Q8NHA4 323 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 ASB17Q8WXJ9 295 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 MNTQ99583 582 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 VRK1Q99986 396 aaPredicted RBP13.69□□□□□ -0.22
USP39-205ENST00000442708 DYNLRB1Q9NP97 96 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 BRD7Q9NPI1 651 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 MRM2Q9UI43 246 aaKnown RBP13.69□□□□□ -0.22
USP39-205ENST00000442708 EXOGQ9Y2C4 368 aaKnown RBP13.69□□□□□ -0.22
USP39-205ENST00000442708 TMEM14AQ9Y6G1 99 aa13.69□□□□□ -0.22
USP39-205ENST00000442708 M0R233 179 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 LILRA1O75019 489 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 SRSF10O75494 262 aaKnown RBP13.68□□□□□ -0.22
USP39-205ENST00000442708 KITLGP21583 273 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 TUBG1P23258 451 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 ATP6V1E1P36543 226 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 ZNF92Q03936 586 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 IL18R1Q13478 541 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 NKPD1Q17RQ9 610 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 KCTD18Q6PI47 426 aaPredicted RBP13.68□□□□□ -0.22
USP39-205ENST00000442708 DEGS2Q6QHC5 323 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 Q6ZR03 302 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 PLEKHG7Q6ZR37 379 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 FAM57BQ71RH2 274 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.68□□□□□ -0.22
USP39-205ENST00000442708 ZNF679Q8IYX0 411 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 OR5L1Q8NGL2 311 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 FBLIM1Q8WUP2 373 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 TRMT61AQ96FX7 289 aaKnown RBP13.68□□□□□ -0.22
USP39-205ENST00000442708 Q96MT0 163 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 COG8Q96MW5 612 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 RHNO1Q9BSD3 238 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 TUBG2Q9NRH3 451 aa13.68□□□□□ -0.22
USP39-205ENST00000442708 PURGQ9UJV8 347 aaKnown RBP13.68□□□□□ -0.22
USP39-205ENST00000442708 ZSCAN5BA6NJL1 495 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 PNPP00491 289 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 ANXA2P07355 339 aaKnown RBP13.67□□□□□ -0.22
USP39-205ENST00000442708 BMP4P12644 408 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 RAC2P15153 192 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 SELENOVP59797 346 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 PSMA6P60900 246 aaKnown RBP13.67□□□□□ -0.22
USP39-205ENST00000442708 MFGE8Q08431 387 aaPredicted RBP13.67□□□□□ -0.22
USP39-205ENST00000442708 CDK5R2Q13319 367 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 Q5PR19 223 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 OR2T2Q6IF00 324 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 IZUMO2Q6UXV1 221 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 C8orf59Q8N0T1 100 aaPredicted RBP13.67□□□□□ -0.22
USP39-205ENST00000442708 OR5AS1Q8N127 324 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 SETD9Q8NE22 299 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 WFDC11Q8NEX6 87 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 PPP1R14AQ96A00 147 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 MSL2Q9HCI7 577 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 MRPS18AQ9NVS2 196 aaKnown RBP13.67□□□□□ -0.22
USP39-205ENST00000442708 FAM206AQ9NX38 181 aa13.67□□□□□ -0.22
USP39-205ENST00000442708 IKZF2Q9UKS7 526 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms