RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MEPEQ9NQ76 525 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CUTCQ9NTM9 273 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 GALPQ9UBC7 116 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CLN8Q9UBY8 286 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR52A1Q9UKL2 312 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CDH10Q9Y6N8 788 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 CEP152O94986 1710 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 IQGAP1P46940 1657 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ATP10BO94823 1461 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 FRG2CA6NGY1 282 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 PP2D1A8MPX8 630 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 LOC110117498-PIK3R3F6TDL0 507 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 M0R036 132 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 EIF3GO75821 320 aaKnown RBP eCLIP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 TTC4O95801 387 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 IFNGP01579 166 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 UCHL3P15374 230 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 HMGB2P26583 209 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 PCK1P35558 622 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 NBL1P41271 181 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 MAGEA12P43365 314 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 DLX5P56178 289 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ERVFC1-1P60608 527 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 SNAP25P60880 206 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 SNRPD1P62314 119 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 RPL8P62917 257 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 RPL19P84098 196 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 IL5RAQ01344 420 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 KLRC3Q07444 240 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 HLA-BQ31612 363 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 SAMD4BQ5PRF9 694 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 FAM45BPQ6NSW5 357 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 GCNT7Q6ZNI0 430 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 AHSA2Q719I0 299 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 APTXQ7Z2E3 356 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMEM135Q86UB9 458 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF491Q8N8L2 437 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF519Q8TB69 540 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 AGAP11Q8TF27 550 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 TESCQ96BS2 214 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 L3HYPDHQ96EM0 354 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 ATXN7L3BQ96GX2 97 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 KCNA7Q96RP8 456 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 MEIS3Q99687 375 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 THYN1Q9P016 225 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR51B4Q9Y5P0 310 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 DIP2CQ9Y2E4 1556 aa3.36□□□□□ -1.87
CDC42BPA-207ENST00000441725 SHANK3Q9BYB0 1731 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 A0A1W2PRG6 482 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 C11orf98E9PRG8 122 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 F5H5T6 163 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 H3BNH8 94 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 SULT1C2O00338 296 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 UBDO15205 165 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 DIRAS1O95057 198 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 BMP15O95972 392 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 IGHG3P01860 377 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 DCNP07585 359 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 FCGR3AP08637 254 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF43P17038 809 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 PRKACGP22612 351 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 SSTR5P35346 364 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 EMDP50402 254 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 AKR1D1P51857 326 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR4D2P58180 307 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 RPS15AP62244 130 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TFAMQ00059 246 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TLE4Q04727 773 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 PUDPQ08623 228 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 BAMBIQ13145 260 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 DUSP7Q16829 419 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 RFX4Q33E94 735 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF718Q3SXZ3 478 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF672Q499Z4 452 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 GLYR1Q49A26 553 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 SYT6Q5T7P8 510 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 LPCAT3Q6P1A2 487 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 DHRS4L2Q6PKH6 230 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMPRSS11AQ6ZMR5 421 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 BPIFB2Q8N4F0 458 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 KIF2BQ8N4N8 673 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF738Q8NE65 137 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 PRSS33Q8NF86 280 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR56A4Q8NGH8 313 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR4A4PQ8NGN8 299 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR13D1Q8NGV5 346 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 OR10X1Q8NGY0 326 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 C8orf44Q96CB5 159 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 MS4A14Q96JA4 679 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 SLC45A3Q96JT2 553 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 LYZL4Q96KX0 146 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 BARHL1Q9BZE3 327 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 GLIPR2Q9H4G4 154 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 ZNF556Q9HAH1 456 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 TMBIM4Q9HC24 238 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 EML4Q9HC35 981 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 KIF25Q9UIL4 384 aa3.35□□□□□ -1.87
CDC42BPA-207ENST00000441725 IKZF2Q9UKS7 526 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms