RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZBTB25P24278 435 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 ZNF93P35789 620 aaPredicted RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 OR1D4P47884 311 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 SLC6A9P48067 706 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 S100A12P80511 92 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 POU3F1Q03052 451 aaPredicted RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 PLCXD2Q0VAA5 305 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 EEF1A1P5Q5VTE0 462 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 GLIPR1L1Q6UWM5 242 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 SHISA6Q6ZSJ9 500 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 ZSCAN4Q8NAM6 433 aaPredicted RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 BHLHE23Q8NDY6 225 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 BAHD1Q8TBE0 780 aaPredicted RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 ZNF296Q8WUU4 475 aaPredicted RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 ASB13Q8WXK3 278 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 KIRREL1Q96J84 757 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 VSTM2LQ96N03 204 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 WDR77Q9BQA1 342 aaPredicted RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 ZNF426Q9BUY5 554 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 FAM117AQ9C073 453 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 LAT2Q9GZY6 243 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 PTGES2Q9H7Z7 377 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 LPAR3Q9UBY5 353 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 ARHGEF17Q96PE2 2063 aaPredicted RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 EIF4E2O60573 245 aaKnown RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 KLF8O95600 359 aaPredicted RBP8.12□□□□□ -1.11
COPB1-202ENST00000439561 ABHD16AO95870 558 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 CD8AP01732 235 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 CTAG1AP78358 180 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 TMEM244Q5VVB8 128 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 LINC00469Q8N7U9 141 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 RNF128Q8TEB7 428 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 SLC37A2Q8TED4 501 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 MCHR2Q969V1 340 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 ASB16Q96NS5 453 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 SEC11CQ9BY50 192 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 MED29Q9NX70 200 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 COA4Q9NYJ1 87 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 PCDHGA1Q9Y5H4 931 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 COL4A3Q01955 1670 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 FREM3P0C091 2139 aa8.12□□□□□ -1.11
COPB1-202ENST00000439561 CCDC163A0A0D9SF12 145 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 FKTNO75072 461 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 NSA2O95478 260 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 DUS4LO95620 317 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 LY86O95711 162 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 S100A8P05109 93 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 CT45A8P0DMV1 189 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 CT45A9P0DMV2 189 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 FXYD4P59646 89 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 RPL27P61353 136 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 SSBP1Q04837 148 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 MGAT2Q10469 447 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ZNF528Q3MIS6 628 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 C14orf28Q4W4Y0 310 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 CT45A2Q5DJT8 189 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 TMEM151BQ8IW70 566 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 EXD3Q8N9H8 876 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 PNLDC1Q8NA58 520 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 OR51T1Q8NGJ9 327 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 OR4A4PQ8NGN8 299 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 OR2I1PQ8NGU4 316 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 OR2AJ1Q8NGZ0 328 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 OR52N5Q8NH56 324 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 NICN1Q9BSH3 213 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 BARX1Q9HBU1 254 aaPredicted RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 XIRP2A4UGR9 3374 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ZNF106Q9H2Y7 1883 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 MED12Q93074 2177 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 TMEM127O75204 238 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 GLRA1P23415 457 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 GUCA1AP43080 201 aaPredicted RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 LPAR6P43657 344 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 DHPSP49366 369 aaPredicted RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 MECP2P51608 486 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 NDUFA6P56556 154 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 POLR2GP62487 172 aaKnown RBP eCLIP8.11□□□□□ -1.11
COPB1-202ENST00000439561 NFATC4Q14934 902 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ZNF141Q15928 474 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 DHRS7BQ6IAN0 325 aaPredicted RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 DNM1P34Q6PK57 102 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 Q6ZSR6 202 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ZNF321PQ8N8H1 164 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 OR5D14Q8NGL3 314 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 FNDC9Q8TBE3 224 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 SPPL3Q8TCT6 385 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 RRNAD1Q96FB5 475 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 SCGB3A2Q96PL1 93 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ZNF251Q9BRH9 671 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 NAA11Q9BSU3 229 aaPredicted RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 TCEAL2Q9H3H9 227 aaPredicted RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 MRPS28Q9Y2Q9 187 aaKnown RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 B3GALT1Q9Y5Z6 326 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 KIF26AQ9ULI4 1882 aaPredicted RBP8.11□□□□□ -1.11
COPB1-202ENST00000439561 PGCP20142 388 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 SERPINA2P20848 420 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 CD1CP29017 333 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 FCGR2CP31995 323 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ZNF674Q2M3X9 581 aa8.11□□□□□ -1.11
COPB1-202ENST00000439561 ABCA11PQ4W5N1 156 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms