RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 LRIT2A6NDA9 550 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 SMCO2A6NFE2 343 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR52A4PA6NMU1 304 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 E9PMD0 336 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 GOLGA8NF8WBI6 632 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 H3BTX0 84 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 K7EQM0 130 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 SGK494L7N484 410 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 PDLIM1O00151 329 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 DNALI1O14645 258 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZBTB5O15062 677 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 CETN3O15182 167 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZSCAN12O43309 604 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ATP8B1O43520 1251 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 SNAI2O43623 268 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 KLRC4O43908 158 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 RAMP1O60894 148 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 RAMP3O60896 148 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 B4GALT2O60909 372 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 VPS26AO75436 327 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 GPX5O75715 221 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 FGFR1OPO95684 399 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 WNT2P09544 360 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 GABRA1P14867 456 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 B4GALT1P15291 398 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 RPA2P15927 270 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 H2AFXP16104 143 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 DRD5P21918 477 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 OPRM1P35372 400 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 RORAP35398 523 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 HSD17B2P37059 387 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR1D4P47884 311 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ALDH3B2P48448 385 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 NPY2RP49146 381 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 CEBPDP49716 269 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 CAV2P51636 162 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 EFNA4P52798 201 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 HADHBP55084 474 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 CARD18P57730 90 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 EIF3EP60228 445 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 NOP14P78316 857 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 OGDHQ02218 1023 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF45Q02386 682 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 LAMTOR4Q0VGL1 99 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 PNOCQ13519 176 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 DOC2AQ14183 400 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 EIF2B1Q14232 305 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 PARP6Q2NL67 630 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 KCTD21Q4G0X4 260 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 PRAMEF20Q5VT98 475 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 CEMP1Q6PRD7 247 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 CYHR1Q6ZMK1 362 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 NIPA1Q7RTP0 329 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 P4HA3Q7Z4N8 544 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 NANOGNBQ7Z5D8 188 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 TSEN54Q7Z6J9 526 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 KIAA1328Q86T90 577 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 PDZD9Q8IXQ8 264 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 KIR2DL5AQ8N109 375 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF397Q8NF99 534 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR51F2Q8NH61 342 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 AKR7LQ8NHP1 331 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR8D1Q8WZ84 308 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 PSMF1Q92530 271 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 RAPGEF5Q92565 580 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 P3H4Q92791 437 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 FBXO32Q969P5 355 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 MRPL53Q96EL3 112 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 DUS3LQ96G46 650 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF514Q96K75 400 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF607Q96SK3 696 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 COQ7Q99807 217 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 DPH7Q9BTV6 452 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 TBC1D10AQ9BXI6 508 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 CAPS2Q9BXY5 557 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 RAB34Q9BZG1 259 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 SIRPDQ9H106 197 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 HAUS4Q9H6D7 363 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 WDR76Q9H967 626 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ROPN1Q9HAT0 212 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 EXOSC3Q9NQT5 275 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 DYRK4Q9NR20 520 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 CNOT2Q9NZN8 540 aaKnown RBP1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 IFNKQ9P0W0 207 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ATXN10Q9UBB4 475 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 LHX3Q9UBR4 397 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 MIOXQ9UGB7 285 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 PYCARDQ9ULZ3 195 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 UBIAD1Q9Y5Z9 338 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 ANKRD36A6QL64 1941 aa1.57□□□□□ -2.16
HMGB1P18-201ENST00000438801 DOCK4Q8N1I0 1966 aa1.56□□□□□ -2.16
HMGB1P18-201ENST00000438801 A0A0J9YVX5 310 aa1.56□□□□□ -2.16
HMGB1P18-201ENST00000438801 A0A0U1RQV5 110 aa1.56□□□□□ -2.16
HMGB1P18-201ENST00000438801 SERTM2A0A1B0GWG4 89 aa1.56□□□□□ -2.16
HMGB1P18-201ENST00000438801 TMEM150BA6NC51 233 aa1.56□□□□□ -2.16
HMGB1P18-201ENST00000438801 FBLL1A6NHQ2 334 aaKnown RBP1.56□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF879B4DU55 563 aa1.56□□□□□ -2.16
HMGB1P18-201ENST00000438801 NPIPA7E9PJI5 369 aa1.56□□□□□ -2.16
HMGB1P18-201ENST00000438801 C11orf98E9PRG8 122 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms