RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 RPRD1AQ96P16 312 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 SLC38A2Q96QD8 506 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 KCNA7Q96RP8 456 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 MBOAT4Q96T53 435 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 RASL11BQ9BPW5 248 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 MRPL45Q9BRJ2 306 aaKnown RBP2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 HES7Q9BYE0 225 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 REG4Q9BYZ8 158 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 RAB34Q9BZG1 259 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 SLC7A5P2Q9GIP4 190 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 SLC25A22Q9H936 323 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 DMAP1Q9NPF5 467 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 DAZ3Q9NR90 486 aaKnown RBP2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 SMOXQ9NWM0 555 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 TMCC3Q9ULS5 477 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 RPL36Q9Y3U8 105 aaKnown RBP2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 HYDINQ4G0P3 5121 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 TRIP11Q15643 1979 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 SVEP1Q4LDE5 3571 aa2.17□□□□□ -2.06
HMGB3P12-201ENST00000438745 GJE1A6NN92 205 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 TRIM49D1C9J1S8 452 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 SLC16A4O15374 487 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 SLC37A4O43826 429 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 SCGNO76038 276 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 LYPLA2O95372 231 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 INSP01308 110 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 IGHG4P01861 327 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 ADRB3P13945 408 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCNCP24863 283 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 PRDX3P30048 256 aaKnown RBP2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCR1P32246 355 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 MAGEA8P43361 318 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 KPNA2P52292 529 aaKnown RBP2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 EFNB2P52799 333 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 GBX2P52951 348 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 ATP1B3P54709 279 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 AIF1P55008 147 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 ATP5J2P56134 94 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 MLF1P58340 268 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 TAS2R19P59542 299 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 TFAMQ00059 246 aaKnown RBP2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 DPYSL2Q16555 572 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 MICBQ29980 383 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CLEC12BQ2HXU8 276 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 EXOC3L2Q2M3D2 409 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 PARP15Q460N3 678 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CARD16Q5EG05 197 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 C1orf100Q5SVJ3 147 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 IGFL2Q6UWQ7 119 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 RFLNAQ6ZTI6 216 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 GDPD3Q7L5L3 318 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 STRADAQ7RTN6 431 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 DOLPP1Q86YN1 238 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 MKXQ8IYA7 352 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 TBC1D21Q8IYX1 336 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CSGALNACT2Q8N6G5 542 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 STEAP2Q8NFT2 490 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 OR51S1Q8NGJ8 323 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 OR5D13Q8NGL4 314 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CCL4L1Q8NHW4 92 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 FBXO30Q8TB52 745 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 FAM110BQ8TC76 370 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CXorf40AQ8TE69 158 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 PATE1Q8WXA2 126 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 MYDGFQ969H8 173 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 UBE2E3Q969T4 207 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CXorf40BQ96DE9 158 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 SMARCD1Q96GM5 515 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 HIST1H4GQ99525 98 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 KLF6Q99612 283 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 TMEM43Q9BTV4 400 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CAPS2Q9BXY5 557 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 SELENOIQ9C0D9 397 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 ASB7Q9H672 318 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 NHEJ1Q9H9Q4 299 aaPredicted RBP2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 SAMSN1Q9NSI8 373 aaKnown RBP2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 MED29Q9NX70 200 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 BFARQ9NZS9 450 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 TMCO1Q9UM00 188 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 ZNF835Q9Y2P0 537 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CACNG2Q9Y698 323 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 CITO14578 2027 aa2.16□□□□□ -2.06
HMGB3P12-201ENST00000438745 ANAPC1Q9H1A4 1944 aa2.15□□□□□ -2.06
HMGB3P12-201ENST00000438745 DYSFO75923 2080 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 TRAV26-1A0A087WT03 109 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 KIR2DL5BA0A0G2JN68 375 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 KIR2DL5BA0A0G2JPC4 375 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 E9PBE3 544 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 RAMP3O60896 148 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 ALOX12BO75342 701 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 MOSP00540 346 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 FGF1P05230 155 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 CCNB1P14635 433 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 POU2F1P14859 743 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 MX1P20591 662 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 FMO3P31513 532 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 BTCP35070 178 aa2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 SRP14P37108 136 aaKnown RBP2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 RPS10P46783 165 aaKnown RBP2.15□□□□□ -2.07
HMGB3P12-201ENST00000438745 MAP3K7CLP57077 242 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms