RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SCG5P05408 212 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 CD3EP07766 207 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 LAMP1P11279 417 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 EPXP11678 715 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 BMP3P12645 472 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 CPMP14384 443 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 RPL12P30050 165 aaKnown RBP4.82□□□□□ -1.64
PTPN4-203ENST00000430976 SNCAP37840 140 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 TSFMP43897 325 aaKnown RBP4.82□□□□□ -1.64
PTPN4-203ENST00000430976 CX3CR1P49238 355 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 TAF6P49848 677 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF83P51522 516 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 DYNLT1P63172 113 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 GSG1LQ6UXU4 331 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 RBPMS2Q6ZRY4 209 aaKnown RBP4.82□□□□□ -1.64
PTPN4-203ENST00000430976 MRGPRGQ86SM5 289 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 ACER1Q8TDN7 264 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 SKA2Q8WVK7 121 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-203ENST00000430976 ATXN7L3BQ96GX2 97 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 PSMG3Q9BT73 122 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-203ENST00000430976 GBA2Q9HCG7 927 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-203ENST00000430976 SERTAD4Q9NUC0 356 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 BEX4Q9NWD9 120 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-203ENST00000430976 MUTYHQ9UIF7 546 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 GPR132Q9UNW8 380 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 HCFC2Q9Y5Z7 792 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 NEO1Q92859 1461 aa4.82□□□□□ -1.64
PTPN4-203ENST00000430976 KANTRA0A1W2PQU2 76 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 RPL35AP18077 110 aaKnown RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 GGT1P19440 569 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 FUT3P21217 361 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 GATA3P23771 443 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ARL2P36404 184 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 AVPR1BP47901 424 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 AGTR2P50052 363 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PITX1P78337 314 aaPredicted RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 RTP5Q14D33 572 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ACOT6Q3I5F7 207 aaPredicted RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PRRT3Q5FWE3 981 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 DLK2Q6UY11 383 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 UBALD2Q8IYN6 164 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 SAMD12Q8N8I0 201 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 FNDC9Q8TBE3 224 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 RDH5Q92781 318 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 GALNT14Q96FL9 552 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 NRIP2Q9BQI9 281 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ORAI3Q9BRQ5 295 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PRRG4Q9BZD6 226 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ZBP1Q9H171 429 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 C20orf141Q9NUB4 165 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 R4GN57 208 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CDC42BPBQ9Y5S2 1711 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CEMIPQ8WUJ3 1361 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 A0A087X1B8 175 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 EMC8O43402 210 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 LRATO95237 230 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ACP5P13686 325 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CRHBPP24387 322 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 TNFSF8P32971 234 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 DCTP40126 519 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 GAS1P54826 345 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 MTCP1P56278 107 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 WNT4P56705 351 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 RHOBP62745 196 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 FKBP1BP68106 108 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PSG4Q00888 419 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM176BQ3YBM2 270 aaPredicted RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CRB2Q5IJ48 1285 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ACSM6Q6P461 480 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PLXDC2Q6UX71 529 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 Q6ZTK2 550 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 TCEANCQ8N8B7 351 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF615Q8N8J6 731 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 OR2G3Q8NGZ4 309 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 OR2T27Q8NH04 317 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 MRAPQ8TCY5 172 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 RSPRY1Q96DX4 576 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 TMEM106CQ9BVX2 250 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 SLIRPQ9GZT3 109 aaKnown RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 LMAN1LQ9HAT1 526 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CD320Q9NPF0 282 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 KCNIP1Q9NZI2 227 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 KIAA1456Q9P272 454 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 IKZF2Q9UKS7 526 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 TBX21Q9UL17 535 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 MYO7AQ13402 2215 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 A0A1W2PRS3 328 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ODAMA1E959 279 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PPIAL4DF5H284 164 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 J3KR12 359 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CD1AP06126 327 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 C8AP07357 584 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ABOP16442 354 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 PRPH2P23942 346 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 GP2P55259 537 aaKnown RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 IZUMO4Q1ZYL8 232 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF648Q5T619 568 aaPredicted RBP4.81□□□□□ -1.64
PTPN4-203ENST00000430976 ZNF683Q8IZ20 524 aa4.81□□□□□ -1.64
PTPN4-203ENST00000430976 CFAP52Q8N1V2 620 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms