RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 HIST1H1CP16403 213 aaKnown RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 CPT2P23786 658 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 CRABP1P29762 137 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 GGT2P36268 569 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 MDH1P40925 334 aaKnown RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 GATA4P43694 442 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 SRP9P49458 86 aaKnown RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 RAD23AP54725 363 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 GNB2P62879 340 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 GK2Q14410 553 aaPredicted RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 RFX4Q33E94 735 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 CLEC12AQ5QGZ9 265 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 LEG1Q6P5S2 330 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 LRRN1Q6UXK5 716 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 ZNF841Q6ZN19 808 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 RNF148Q8N7C7 305 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 C19orf18Q8NEA5 215 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 OR4K13Q8NH42 304 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 FANK1Q8TC84 345 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 NEIL1Q96FI4 390 aaPredicted RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 MS4A7Q9GZW8 240 aaPredicted RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 MYLK2Q9H1R3 596 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 OR52D1Q9H346 318 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 FN3KQ9H479 309 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 ZNF696Q9H7X3 374 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 UNKLQ9H9P5 680 aaKnown RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 ZMAT3Q9HA38 289 aaKnown RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 TMEM100Q9NV29 134 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 MIOXQ9UGB7 285 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 AURKCQ9UQB9 309 aa8.38□□□□□ -1.07
GACAT3-201ENST00000426539 FAM32AQ9Y421 112 aaKnown RBP8.38□□□□□ -1.07
GACAT3-201ENST00000426539 TRAV40A0A0B4J280 105 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 KIR2DS1A0A191URI9 304 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 C5orf63A6NC05 138 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 OR6C68A6NDL8 312 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 C22orf46C9J442 243 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 NDUFAB1O14561 156 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 PSKH1P11801 424 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 FPR3P25089 353 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 TRAP1Q12931 704 aaKnown RBP8.37□□□□□ -1.07
GACAT3-201ENST00000426539 MPPED2Q15777 294 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 PRAMEF6Q5VXH4 476 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 PGM2L1Q6PCE3 622 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 DNM1P34Q6PK57 102 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 BTNL3Q6UXE8 466 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 ZBTB46Q86UZ6 589 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 FITM2Q8N6M3 262 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 OR10S1Q8NGN2 331 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 Q8TCH9 128 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 ZNRF4Q8WWF5 429 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 MAP6Q96JE9 813 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 DDOQ99489 341 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 CDADC1Q9BWV3 514 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 RPRD1BQ9NQG5 326 aaKnown RBP8.37□□□□□ -1.07
GACAT3-201ENST00000426539 MRPL22Q9NWU5 206 aaKnown RBP8.37□□□□□ -1.07
GACAT3-201ENST00000426539 CYB5R1Q9UHQ9 305 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 SAMD4AQ9UPU9 718 aaKnown RBP8.37□□□□□ -1.07
GACAT3-201ENST00000426539 V9GYQ6 96 aa8.37□□□□□ -1.07
GACAT3-201ENST00000426539 F5H5K5 113 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 FAM20BO75063 409 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 GADD45GO95257 159 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 RENP00797 406 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 MDKP21741 143 aaPredicted RBP8.36□□□□□ -1.07
GACAT3-201ENST00000426539 SLC6A6P31641 620 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 PSMB10P40306 273 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 CD200P41217 278 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 MTNR1AP48039 350 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 GSSP48637 474 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 PITPNBP48739 271 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 FGF12P61328 243 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 DEFB112Q30KQ8 113 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 SNAI3Q3KNW1 292 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 WDR25Q64LD2 544 aaPredicted RBP8.36□□□□□ -1.07
GACAT3-201ENST00000426539 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 CELF2-AS1Q8N7Q2 184 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 SDR9C7Q8NEX9 313 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 OR8B3Q8NGG8 313 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 SLC25A28Q96A46 364 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 SLCO4A1Q96BD0 722 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 PYURFQ96I23 114 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 PLEKHA8Q96JA3 519 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 OR8B2Q96RD0 313 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 PITX2Q99697 317 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 ATF6BQ99941 703 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 NUDT16L1Q9BRJ7 211 aaKnown RBP8.36□□□□□ -1.07
GACAT3-201ENST00000426539 IFT27Q9BW83 186 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 HCAR1Q9BXC0 346 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 PRDM13Q9H4Q3 707 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 GORASP2Q9H8Y8 452 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 SPAG4Q9NPE6 437 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 KRCC1Q9NPI7 259 aaPredicted RBP8.36□□□□□ -1.07
GACAT3-201ENST00000426539 CTSZQ9UBR2 303 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 TMCC3Q9ULS5 477 aa8.36□□□□□ -1.07
GACAT3-201ENST00000426539 LRRC30A6NM36 301 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 TNFRSF13BO14836 293 aaPredicted RBP8.35□□□□□ -1.07
GACAT3-201ENST00000426539 HOXA3O43365 443 aaPredicted RBP8.35□□□□□ -1.07
GACAT3-201ENST00000426539 FCN3O75636 299 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 PTBP3O95758 552 aaKnown RBP8.35□□□□□ -1.07
GACAT3-201ENST00000426539 LCATP04180 440 aa8.35□□□□□ -1.07
GACAT3-201ENST00000426539 OMGP23515 440 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms