RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PGAM5Q96HS1 289 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 CGGBP1Q9UFW8 167 aaPredicted RBP23.24■■□□□ 1.31
LDB1-202ENST00000425280 KLK13Q9UKR3 277 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 YES1P07947 543 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 DBHP09172 617 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 ZNF24P17028 368 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 GNALP38405 381 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 DDOSTP39656 456 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 ZNF57Q68EA5 555 aaPredicted RBP23.24■■□□□ 1.31
LDB1-202ENST00000425280 FAM3DQ96BQ1 224 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 RABL2AQ9UBK7 228 aaPredicted RBP23.24■■□□□ 1.31
LDB1-202ENST00000425280 RABL2BQ9UNT1 228 aa23.24■■□□□ 1.31
LDB1-202ENST00000425280 DCDC2BA2VCK2 349 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 SYNGR3O43761 229 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 ZNF32P17041 273 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 MAP2K3P46734 347 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 SLC6A9P48067 706 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 POU3F4P49335 361 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 DGCR2P98153 550 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 SCRN3Q0VDG4 424 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 SLC17A5Q9NRA2 495 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 ZFHX4Q86UP3 3567 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 CUL9Q8IWT3 2517 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 M0R135 149 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 CTDSPLO15194 276 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 IGHG3P01860 377 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 PATE4P0C8F1 98 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 CRYGSP22914 178 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 GFOD2Q3B7J2 385 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 GLYATL3Q5SZD4 288 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 ZNF774Q6NX45 483 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 ZNF813Q6ZN06 617 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 LYPD6Q86Y78 171 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 SKA3Q8IX90 412 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 NKAIN3Q8N8D7 197 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 YIPF5Q969M3 257 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 SPTSSAQ969W0 71 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 PPP1R14BQ96C90 147 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 ZNF799Q96GE5 643 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 FAM71F1Q96KD3 344 aaPredicted RBP23.23■■□□□ 1.31
LDB1-202ENST00000425280 KCNK15Q9H427 330 aa23.23■■□□□ 1.31
LDB1-202ENST00000425280 PTPRZ1P23471 2315 aaPredicted RBP23.22■■□□□ 1.31
LDB1-202ENST00000425280 KLK10O43240 276 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 LYRM1O43325 122 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 IGLV3-1P01715 115 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 HTR2CP28335 458 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 C2orf76Q3KRA6 126 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 ZNF529Q6P280 563 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 DOK3Q7L591 496 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 ZNF554Q86TJ5 538 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 MCEMP1Q8IX19 187 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 OR1M1Q8NGA1 313 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 FGFBP3Q8TAT2 258 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 NEURL2Q9BR09 285 aa23.22■■□□□ 1.31
LDB1-202ENST00000425280 LOC100289279A0A1B0GTE1 492 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 LOC390937A0A1W2PQ73 354 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 APOC1P02654 83 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 TMIGD3P0DMS9 266 aaPredicted RBP23.21■■□□□ 1.31
LDB1-202ENST00000425280 ZNF20P17024 532 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 CDK2P24941 298 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 RNASE12Q5GAN4 147 aaKnown RBP23.21■■□□□ 1.31
LDB1-202ENST00000425280 SLC16A14Q7RTX9 510 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 OR5D14Q8NGL3 314 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 OR6M1Q8NGM8 313 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 OR1F12Q8NHA8 337 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 LYZL4Q96KX0 146 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 OR6C65A6NJZ3 312 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 RPL36A-HNRNPH2H7BZ11 118 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 GSTZ1O43708 216 aaPredicted RBP23.21■■□□□ 1.31
LDB1-202ENST00000425280 TGM6O95932 706 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 CD3GP09693 182 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 ABOP16442 354 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 BDKRB2P30411 391 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 KIR2DL3P43628 341 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 PTH2RP49190 550 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 EFNB2P52799 333 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 C1orf100Q5SVJ3 147 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 MZT2BQ6NZ67 158 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 JAGN1Q8N5M9 183 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 AKR7LQ8NHP1 331 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 RBFOX1Q9NWB1 397 aaKnown RBP23.21■■□□□ 1.31
LDB1-202ENST00000425280 TIMM10BQ9Y5J6 103 aa23.21■■□□□ 1.31
LDB1-202ENST00000425280 A0A0U1RQV5 110 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 OR6C6A6NF89 314 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 PSG4Q00888 419 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 ECH1Q13011 328 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 NRN1LQ496H8 165 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 HACD4Q5VWC8 232 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 NUFIP2Q7Z417 695 aaKnown RBP23.2■■□□□ 1.3
LDB1-202ENST00000425280 APH1AQ96BI3 265 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 OR2H1Q9GZK4 316 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 MMP28Q9H239 520 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 RHBDD3Q9Y3P4 386 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 LOC400499M0QZD8 3231 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 PCBD1P61457 104 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 ARF1P84077 181 aaKnown RBP23.2■■□□□ 1.3
LDB1-202ENST00000425280 STK11Q15831 433 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 SLC36A2Q495M3 483 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 TMEM69Q5SWH9 247 aa23.2■■□□□ 1.3
LDB1-202ENST00000425280 OR13C9Q8NGT0 318 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms