RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 CSF3P09919 207 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 SBK2P0C263 348 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 NAT2P11245 290 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 SLC15A1P46059 708 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 ROM1Q03395 351 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 OCLNQ16625 522 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 MOGQ16653 247 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 NKPD1Q17RQ9 610 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 ENTHD1Q8IYW4 607 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 COX4I2Q96KJ9 171 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 MNTQ99583 582 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 TPK1Q9H3S4 243 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 CENPMQ9NSP4 180 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 PTTG3PQ9NZH4 202 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 NKX1-2Q9UD57 310 aaPredicted RBP15.9■□□□□ 0.14
PTCD3-204ENST00000418628 GPR160Q9UJ42 338 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 GMPPBQ9Y5P6 360 aa15.9■□□□□ 0.14
PTCD3-204ENST00000418628 LOC100130705A0A1B0GUX0 176 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 TRIM64A6NGJ6 449 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 TRIM64BA6NI03 449 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 LIPAP38571 399 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 HCCSP53701 268 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 GK2Q14410 553 aaPredicted RBP15.89■□□□□ 0.13
PTCD3-204ENST00000418628 HLXQ14774 488 aaPredicted RBP15.89■□□□□ 0.13
PTCD3-204ENST00000418628 DEGS2Q6QHC5 323 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 Q6ZR03 302 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 SPATC1Q76KD6 591 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 C10orf105Q8TEF2 133 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 SNX33Q8WV41 574 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 SPSB4Q96A44 273 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 CMBLQ96DG6 245 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 CYSLTR2Q9NS75 346 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 CLN6Q9NWW5 311 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 IMPAD1Q9NX62 359 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 LAMP5Q9UJQ1 280 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 LRP12Q9Y561 859 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 TMEM14AQ9Y6G1 99 aa15.89■□□□□ 0.13
PTCD3-204ENST00000418628 IGHV4-30-2A0A087WSY4 118 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 IQCF6A8MYZ5 107 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 VWC2LB2RUY7 222 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 HPXP02790 462 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 LCATP04180 440 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 CD55P08174 381 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 SLC6A9P48067 706 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 CX3CR1P49238 355 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 PRKXP51817 358 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 DSCR9P59020 149 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 PSMA6P60900 246 aaKnown RBP15.88■□□□□ 0.13
PTCD3-204ENST00000418628 POU4F2Q12837 409 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 TNK1Q13470 666 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 LRRC36Q1X8D7 754 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 PCGF3Q3KNV8 242 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 MEDAGQ5VYS4 303 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 SLC35F2Q8IXU6 374 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 RHOXF1Q8NHV9 184 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 RFKQ969G6 155 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 OR8B4Q96RC9 309 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 NIPAL2Q9H841 368 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 RNPEPL1Q9HAU8 725 aa15.88■□□□□ 0.13
PTCD3-204ENST00000418628 H2AFY2Q9P0M6 372 aaPredicted RBP15.88■□□□□ 0.13
PTCD3-204ENST00000418628 J3QRE1 110 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ENTPD6O75354 484 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 IGHV1-46P01743 117 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 APOC1P02654 83 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ERCC1P07992 297 aaPredicted RBP15.87■□□□□ 0.13
PTCD3-204ENST00000418628 SLC2A1P11166 492 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 FOSL1P15407 271 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 GIFP27352 417 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 DCTDP32321 178 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 MAGEB1P43366 347 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ZNF81P51508 661 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ZNF121P58317 390 aaPredicted RBP15.87■□□□□ 0.13
PTCD3-204ENST00000418628 MRPS11P82912 194 aaKnown RBP15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ZNF92Q03936 586 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 CDK5R2Q13319 367 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 TAF13Q15543 124 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 FAM209AQ5JX71 171 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 GLYATL3Q5SZD4 288 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 LRRN1Q6UXK5 716 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 CIARTQ8N365 385 aaPredicted RBP15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ZNF786Q8N393 782 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 GALNT4Q8N4A0 578 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ZNF283Q8N7M2 679 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 OR51G2Q8NGK0 314 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 THEM6Q8WUY1 208 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 APH1BQ8WW43 257 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ASB17Q8WXJ9 295 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 REPIN1Q9BWE0 567 aaKnown RBP15.87■□□□□ 0.13
PTCD3-204ENST00000418628 ZNF319Q9P2F9 582 aa15.87■□□□□ 0.13
PTCD3-204ENST00000418628 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTCD3-204ENST00000418628 NDUFS8O00217 210 aa15.86■□□□□ 0.13
PTCD3-204ENST00000418628 PHYHO14832 338 aa15.86■□□□□ 0.13
PTCD3-204ENST00000418628 TIMM8AO60220 97 aaPredicted RBP15.86■□□□□ 0.13
PTCD3-204ENST00000418628 MPZL2O60487 215 aa15.86■□□□□ 0.13
PTCD3-204ENST00000418628 LILRA1O75019 489 aa15.86■□□□□ 0.13
PTCD3-204ENST00000418628 SRSF10O75494 262 aaKnown RBP15.86■□□□□ 0.13
PTCD3-204ENST00000418628 RP2O75695 350 aa15.86■□□□□ 0.13
PTCD3-204ENST00000418628 H2BFMP0C1H6 154 aa15.86■□□□□ 0.13
PTCD3-204ENST00000418628 HSD11B1P28845 292 aa15.86■□□□□ 0.13
PTCD3-204ENST00000418628 ADARB1P78563 741 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms